RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ARPC5O15511 151 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.122e-6■□□□□ 8.9
NEDD8-204ENST00000526430 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
NEDD8-204ENST00000526430 FGF7P21781 194 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 CAMLGP49069 296 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 LYZP61626 148 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 SELENOTP62341 195 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 LGALSLQ3ZCW2 172 aaPredicted RBP8.07□□□□□ -1.12
NEDD8-204ENST00000526430 GCSAMLQ5JQS6 135 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 GINS3Q9BRX5 216 aa8.07□□□□□ -1.12
NEDD8-204ENST00000526430 DMBT1Q9UGM3 2413 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-204ENST00000526430 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
NEDD8-204ENST00000526430 ORM2P19652 201 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 EIF2B2P49770 351 aaKnown RBP8.06□□□□□ -1.12
NEDD8-204ENST00000526430 LAMTOR1Q6IAA8 161 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 LCN12Q6JVE5 192 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 UHRF2Q96PU4 802 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 METTL26Q96S19 204 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 RSG1Q9BU20 258 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 PBDC1Q9BVG4 233 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 MFFQ9GZY8 342 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 RABAC1Q9UI14 185 aa8.06□□□□□ -1.12
NEDD8-204ENST00000526430 TRAV25A0A0B4J276 109 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 H3BRN7 92 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 TSPAN4O14817 238 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 MPDU1O75352 247 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 C1QBP02746 253 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 FABP1P07148 127 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 LEMD1Q68G75 181 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
NEDD8-204ENST00000526430 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 FAM24BQ8N5W8 94 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 SHANK2-AS3Q9BTD1 123 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 SCRT1Q9BWW7 348 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
NEDD8-204ENST00000526430 ARL6Q9H0F7 186 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 DOK5Q9P104 306 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 PXMP4Q9Y6I8 212 aa8.05□□□□□ -1.12
NEDD8-204ENST00000526430 TRAV5A0A0B4J249 113 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 HYPMO75409 117 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 SCGB2A1O75556 95 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 CD7P09564 240 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 AP2S1P53680 142 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-204ENST00000526430 ZNF345Q14585 488 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 AKAP14Q86UN6 197 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 INO80EQ8NBZ0 244 aaPredicted RBP8.04□□□□□ -1.12
NEDD8-204ENST00000526430 DYNLRB2Q8TF09 96 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 DCANP1Q8TF63 244 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 OVOL2Q9BRP0 275 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 SLC25A32Q9H2D1 315 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 DNAJC4Q9NNZ3 241 aa8.04□□□□□ -1.12
NEDD8-204ENST00000526430 A0A1W2PS18 150 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 SOCS3O14543 225 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 ATP6V0CP27449 155 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 B2MP61769 119 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 C1orf194Q5T5A4 169 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 WFDC3Q8IUB2 231 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 FAM167A-AS1Q96KT0 104 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 SH3BGRL3Q9H299 93 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 SEPSECSQ9HD40 501 aaKnown RBP8.03□□□□□ -1.12
NEDD8-204ENST00000526430 HIGD1AQ9Y241 93 aa8.03□□□□□ -1.12
NEDD8-204ENST00000526430 K7EQG2 157 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 IFNA5P01569 189 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 OR5G3P0C626 314 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 CD81P60033 236 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 RAB31Q13636 194 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 ODF3L2Q3SX64 289 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-204ENST00000526430 TMUB2Q71RG4 321 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 LINC00305Q7Z4B0 112 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 GBGT1Q8N5D6 347 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 HSD17B11Q8NBQ5 300 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 SPAG8Q99932 426 aaPredicted RBP8.02□□□□□ -1.13
NEDD8-204ENST00000526430 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
NEDD8-204ENST00000526430 IGKV3-7A0A075B6H7 116 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-204ENST00000526430 A0A0D9SG52 128 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 A0A0J9YWU9 116 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 TAAR5O14804 337 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 EIF3GO75821 320 aaKnown RBP eCLIP8.01□□□□□ -1.131e-7■■■■□ 19.4
NEDD8-204ENST00000526430 NUP62P37198 522 aaPredicted RBP8.01□□□□□ -1.13
NEDD8-204ENST00000526430 GUCA2BQ16661 112 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 Q6ZRG5 221 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 C9orf62Q8N4C0 152 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 OR2G3Q8NGZ4 309 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 SCGB1C1Q8TD33 95 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 HYLS1Q96M11 299 aa8.01□□□□□ -1.13
NEDD8-204ENST00000526430 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms