RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 RNF24Q9Y225 148 aa13.02□□□□□ -0.33
CCS-204ENST00000526066 H3BRN7 92 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 BUB3O43684 328 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 FRMD6-AS1P0C7T7 363 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 M6PRP20645 277 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 C1orf194Q5T5A4 169 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
CCS-204ENST00000526066 CHEK1O14757 476 aa13□□□□□ -0.33
CCS-204ENST00000526066 GCSAMLQ5JQS6 135 aa13□□□□□ -0.33
CCS-204ENST00000526066 ZFAND6Q6FIF0 208 aa13□□□□□ -0.33
CCS-204ENST00000526066 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
CCS-204ENST00000526066 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
CCS-204ENST00000526066 CITED4Q96RK1 184 aa13□□□□□ -0.33
CCS-204ENST00000526066 MRPL32Q9BYC8 188 aaKnown RBP13□□□□□ -0.33
CCS-204ENST00000526066 TECRQ9NZ01 308 aaKnown RBP13□□□□□ -0.33
CCS-204ENST00000526066 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 UMAD1C9J7I0 102 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
CCS-204ENST00000526066 EDN2P20800 178 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 PHYHIPLQ96FC7 376 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 UHRF2Q96PU4 802 aa12.99□□□□□ -0.33
CCS-204ENST00000526066 IGHV3-49A0A0A0MS15 119 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 CD5P06127 495 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 GP9P14770 177 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 RAB2AP61019 212 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 RHOBP62745 196 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 AKR1C8PQ5T2L2 129 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 GPR82Q96P67 336 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 RPRMQ9NS64 109 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 FUT9Q9Y231 359 aa12.98□□□□□ -0.33
CCS-204ENST00000526066 DYNC2H1Q8NCM8 4307 aaKnown RBP12.98□□□□□ -0.33
CCS-204ENST00000526066 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 IGLV1-51P01701 117 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
CCS-204ENST00000526066 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 GLMPQ8WWB7 406 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
CCS-204ENST00000526066 MLXQ9UH92 298 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 BIRC6Q9NR09 4857 aa12.97□□□□□ -0.33
CCS-204ENST00000526066 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
CCS-204ENST00000526066 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
CCS-204ENST00000526066 FAM90A2PQ658T7 463 aa12.96□□□□□ -0.33
CCS-204ENST00000526066 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.33
CCS-204ENST00000526066 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.33
CCS-204ENST00000526066 TRAV25A0A0B4J276 109 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 HELTA6NFD8 242 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 RPL7P18124 248 aaKnown RBP12.95□□□□□ -0.34
CCS-204ENST00000526066 CDC34P49427 236 aaPredicted RBP12.95□□□□□ -0.34
CCS-204ENST00000526066 RAB5CP51148 216 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 MORN5Q5VZ52 161 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 FAM122CQ6P4D5 195 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 DPPA3Q6W0C5 159 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
CCS-204ENST00000526066 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 RYR2Q92736 4967 aa12.95□□□□□ -0.34
CCS-204ENST00000526066 SULT1A2P50226 295 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 TAS2R45P59539 299 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 SIGLEC15Q6ZMC9 328 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 TCF24Q7RTU0 167 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
CCS-204ENST00000526066 MRPS12O15235 138 aaKnown RBP12.93□□□□□ -0.34
CCS-204ENST00000526066 GALR1P47211 349 aa12.93□□□□□ -0.34
CCS-204ENST00000526066 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
CCS-204ENST00000526066 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
CCS-204ENST00000526066 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
CCS-204ENST00000526066 TRAV5A0A0B4J249 113 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 TSPAN4O14817 238 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 KHDC3LQ587J8 217 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 TM2D3Q9BRN9 247 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 SLC25A2Q9BXI2 301 aa12.92□□□□□ -0.34
CCS-204ENST00000526066 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
CCS-204ENST00000526066 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
CCS-204ENST00000526066 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
CCS-204ENST00000526066 ALKAL2Q6UX46 152 aa12.91□□□□□ -0.34
CCS-204ENST00000526066 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
CCS-204ENST00000526066 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
CCS-204ENST00000526066 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms