RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 ATP6V0CP27449 155 aa14.05□□□□□ -0.16
PTPRK-218ENST00000525459 MEOX2P50222 304 aa14.05□□□□□ -0.16
PTPRK-218ENST00000525459 ACOT6Q3I5F7 207 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-218ENST00000525459 NRN1Q9NPD7 142 aa14.05□□□□□ -0.16
PTPRK-218ENST00000525459 MBP02144 154 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 CMC4P56277 68 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-218ENST00000525459 TMUB2Q71RG4 321 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 FAM110AQ9BQ89 295 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 SLC25A32Q9H2D1 315 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 MS4A6AQ9H2W1 248 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 DNASE2O00115 360 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-218ENST00000525459 BPIFA4PQ86YQ2 179 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 STXBP6Q8NFX7 210 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 CYTL1Q9NRR1 136 aa14.04□□□□□ -0.16
PTPRK-218ENST00000525459 M6PRP20645 277 aa14.03□□□□□ -0.16
PTPRK-218ENST00000525459 RHOBP62745 196 aa14.03□□□□□ -0.16
PTPRK-218ENST00000525459 FAM78BQ5VT40 261 aa14.03□□□□□ -0.16
PTPRK-218ENST00000525459 ZNF471Q9BX82 626 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-218ENST00000525459 SEPSECSQ9HD40 501 aaKnown RBP14.03□□□□□ -0.16
PTPRK-218ENST00000525459 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-218ENST00000525459 CD300CQ08708 224 aa14.02□□□□□ -0.16
PTPRK-218ENST00000525459 PRR25Q96S07 402 aa14.02□□□□□ -0.16
PTPRK-218ENST00000525459 SELENOKQ9Y6D0 94 aa14.02□□□□□ -0.16
PTPRK-218ENST00000525459 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 ATF4P18848 351 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-218ENST00000525459 CD81P60033 236 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 LGALSLQ3ZCW2 172 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-218ENST00000525459 LEMD1Q68G75 181 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 FUT9Q9Y231 359 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 TPT1P13693 172 aaKnown RBP14.01□□□□□ -0.17
PTPRK-218ENST00000525459 GCSAMLQ5JQS6 135 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 STOML3Q8TAV4 291 aa14.01□□□□□ -0.17
PTPRK-218ENST00000525459 A0A087X0K7 114 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 K7EQG2 157 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 SPP1P10451 314 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 TAS2R45P59539 299 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 C9orf62Q8N4C0 152 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 GBGT1Q8N5D6 347 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 SH3BGRL3Q9H299 93 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 TMEM14CQ9P0S9 112 aa14□□□□□ -0.17
PTPRK-218ENST00000525459 SEC11BP0C7V7 166 aa13.99□□□□□ -0.17
PTPRK-218ENST00000525459 SNRPD3P62318 126 aaKnown RBP13.99□□□□□ -0.17
PTPRK-218ENST00000525459 A0A1W2PPV4 95 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 ID1P41134 155 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 TFPI2P48307 235 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 GUK1Q16774 197 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 KHDC3LQ587J8 217 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 EIF5AL1Q6IS14 154 aaKnown RBP13.98□□□□□ -0.17
PTPRK-218ENST00000525459 BAP18Q8IXM2 172 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 OR10G4Q8NGN3 311 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 OR10G9Q8NGN4 311 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 OR10G7Q8NGN6 311 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 OR11H12B2RN74 326 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 ISLRO14498 428 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 MRPS12O15235 138 aaKnown RBP13.98□□□□□ -0.17
PTPRK-218ENST00000525459 PSMB3P49720 205 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 TMEM41BQ5BJD5 291 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 MORN5Q5VZ52 161 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 LCN15Q6UWW0 184 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 SLC51BQ86UW2 128 aa13.98□□□□□ -0.17
PTPRK-218ENST00000525459 CD7P09564 240 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 RAB2AP61019 212 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 WFDC3Q8IUB2 231 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 HRH4Q9H3N8 390 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 SMAD5-AS1Q9Y6J3 95 aa13.97□□□□□ -0.17
PTPRK-218ENST00000525459 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-218ENST00000525459 DEFA6Q01524 100 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 ODF3L2Q3SX64 289 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 MIR17HGQ75NE6 70 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 Q8N1Y9 231 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 SLC50A1Q9BRV3 221 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 MAP6D1Q9H9H5 199 aa13.96□□□□□ -0.17
PTPRK-218ENST00000525459 ZNF253O75346 499 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 PQLC2Q6ZP29 291 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 SLC25A2Q9BXI2 301 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 CLEC5AQ9NY25 188 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 RFNGQ9Y644 331 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 A8MZ25 164 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 K7EIL1 84 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 SOCS3O14543 225 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 PDE6HQ13956 83 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 FAM122CQ6P4D5 195 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 FAM167A-AS1Q96KT0 104 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 C16orf92Q96LL3 132 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 ACTR3CQ9C0K3 210 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-218ENST00000525459 OR51M1Q9H341 326 aa13.95□□□□□ -0.18
PTPRK-218ENST00000525459 TRAV5A0A0B4J249 113 aa13.94□□□□□ -0.18
PTPRK-218ENST00000525459 OR7C2O60412 319 aa13.94□□□□□ -0.18
PTPRK-218ENST00000525459 PRB2P02812 416 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-218ENST00000525459 HIST1H1EP10412 219 aaKnown RBP13.94□□□□□ -0.18
PTPRK-218ENST00000525459 SPATA31B1PQ5VZV4 182 aa13.94□□□□□ -0.18
PTPRK-218ENST00000525459 RPP25LQ8N5L8 163 aaKnown RBP13.94□□□□□ -0.18
PTPRK-218ENST00000525459 LRRC20Q8TCA0 184 aa13.94□□□□□ -0.18
PTPRK-218ENST00000525459 C19orf73Q9NVV2 129 aa13.94□□□□□ -0.18
PTPRK-218ENST00000525459 ZNF688P0C7X2 276 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms