RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 FCN2Q15485 313 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 RNF182Q8N6D2 247 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 MAPKAPK5-AS1Q8N8E1 139 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 OR1B1Q8NGR6 318 aa16.81■□□□□ 0.28
USP47-205ENST00000525257 AZU1P20160 251 aa16.8■□□□□ 0.28
USP47-205ENST00000525257 TMEM182Q6ZP80 229 aaPredicted RBP16.8■□□□□ 0.28
USP47-205ENST00000525257 BPIFCQ8NFQ6 507 aa16.8■□□□□ 0.28
USP47-205ENST00000525257 OR4D5Q8NGN0 318 aa16.8■□□□□ 0.28
USP47-205ENST00000525257 RABL2AQ9UBK7 228 aaPredicted RBP16.8■□□□□ 0.28
USP47-205ENST00000525257 RABL2BQ9UNT1 228 aa16.8■□□□□ 0.28
USP47-205ENST00000525257 TRAV12-2A0A075B6T6 113 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 TRAV8-2A0A0B4J237 113 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 TSPOP30536 169 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 FGL1Q08830 312 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 GPR82Q96P67 336 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 TMEM147Q9BVK8 224 aa16.79■□□□□ 0.28
USP47-205ENST00000525257 SLC25A39Q9BZJ4 359 aaPredicted RBP16.79■□□□□ 0.28
USP47-205ENST00000525257 DUXBA0A1W2PPF3 345 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 PLAC8L1A1L4L8 177 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 PRSS46E5RG02 174 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 B2MP61769 119 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 GPR141Q7Z602 305 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 TMED4Q7Z7H5 227 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 DNAH5Q8TE73 4624 aa16.78■□□□□ 0.28
USP47-205ENST00000525257 ATP5G1P05496 136 aa16.77■□□□□ 0.28
USP47-205ENST00000525257 ATP5G3P48201 142 aa16.77■□□□□ 0.28
USP47-205ENST00000525257 ZNF738Q8NE65 137 aa16.77■□□□□ 0.28
USP47-205ENST00000525257 LINC00588Q9Y4M8 146 aa16.77■□□□□ 0.28
USP47-205ENST00000525257 PIGBOS1A0A0B4J2F0 54 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 BOLA2-SMG1P6H3BVE0 249 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 WRBO00258 174 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 MED6O75586 246 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 CCL18P55774 89 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 AKR1C1Q04828 323 aa16.76■□□□□ 0.27
USP47-205ENST00000525257 CIB3Q96Q77 187 aaPredicted RBP16.76■□□□□ 0.27
USP47-205ENST00000525257 RSL24D1Q9UHA3 163 aaKnown RBP16.76■□□□□ 0.27
USP47-205ENST00000525257 RPP30P78346 268 aaKnown RBP16.75■□□□□ 0.27
USP47-205ENST00000525257 RNF141Q8WVD5 230 aa16.75■□□□□ 0.27
USP47-205ENST00000525257 LINC01587Q99440 93 aa16.75■□□□□ 0.27
USP47-205ENST00000525257 CBY3A6NI87 242 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 H3BP45 60 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 H3BRN7 92 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 SYNGR2O43760 224 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 SLC25A6P12236 298 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 HTN1P15515 57 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 VAMP1P23763 118 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 S100A7P31151 101 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 RHOBP62745 196 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 HIST1H1AQ02539 215 aaPredicted RBP16.74■□□□□ 0.27
USP47-205ENST00000525257 ACOT7LQ6ZUV0 252 aa16.74■□□□□ 0.27
USP47-205ENST00000525257 CCDC59Q9P031 241 aaKnown RBP16.74■□□□□ 0.27
USP47-205ENST00000525257 PRB4P10163 310 aaPredicted RBP16.73■□□□□ 0.27
USP47-205ENST00000525257 CLINT1Q14677 625 aa16.73■□□□□ 0.27
USP47-205ENST00000525257 TMEM128Q5BJH2 165 aa16.73■□□□□ 0.27
USP47-205ENST00000525257 SPANXN5Q5MJ07 72 aa16.73■□□□□ 0.27
USP47-205ENST00000525257 LRTM2Q8N967 370 aa16.72■□□□□ 0.27
USP47-205ENST00000525257 DYNC2LI1Q8TCX1 351 aa16.72■□□□□ 0.27
USP47-205ENST00000525257 SHANK2-AS3Q9BTD1 123 aa16.72■□□□□ 0.27
USP47-205ENST00000525257 PPP1R14DQ9NXH3 145 aa16.72■□□□□ 0.27
USP47-205ENST00000525257 SMCO3A2RU48 225 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 TAS2R60P59551 318 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 SSX7Q7RTT5 188 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 TMEM256Q8N2U0 113 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 OR8A1Q8NGG7 326 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 C16orf74Q96GX8 76 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 MRPS26Q9BYN8 205 aaKnown RBP16.71■□□□□ 0.27
USP47-205ENST00000525257 HIGD1AQ9Y241 93 aa16.71■□□□□ 0.27
USP47-205ENST00000525257 RPL7P18124 248 aaKnown RBP16.7■□□□□ 0.26
USP47-205ENST00000525257 FAUP35544 74 aaKnown RBP16.7■□□□□ 0.26
USP47-205ENST00000525257 RAP2BP61225 183 aa16.7■□□□□ 0.26
USP47-205ENST00000525257 CYP2G1PQ6ZSU1 146 aa16.7■□□□□ 0.26
USP47-205ENST00000525257 SPATA12Q7Z6I5 190 aa16.7■□□□□ 0.26
USP47-205ENST00000525257 STRAPQ9Y3F4 350 aaKnown RBP16.7■□□□□ 0.26
USP47-205ENST00000525257 TIMM8BQ9Y5J9 83 aaPredicted RBP16.7■□□□□ 0.26
USP47-205ENST00000525257 FABP12A6NFH5 140 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 IL5P05113 134 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 HOXB5P09067 269 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 CXCL3P19876 107 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 TMEM144Q7Z5S9 345 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 UHRF2Q96PU4 802 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 SOSTQ9BQB4 213 aa16.69■□□□□ 0.26
USP47-205ENST00000525257 NOP10Q9NPE3 64 aaKnown RBP16.69■□□□□ 0.26
USP47-205ENST00000525257 OR5G3P0C626 314 aa16.68■□□□□ 0.26
USP47-205ENST00000525257 TNFSF8P32971 234 aa16.68■□□□□ 0.26
USP47-205ENST00000525257 PSG3Q16557 428 aa16.68■□□□□ 0.26
USP47-205ENST00000525257 Q8N1X5 172 aa16.68■□□□□ 0.26
USP47-205ENST00000525257 LRRC20Q8TCA0 184 aa16.68■□□□□ 0.26
USP47-205ENST00000525257 HYPMO75409 117 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 SFT2D2O95562 160 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 LINC00869P0C866 280 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 PPP1R1AQ13522 171 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 RAB2BQ8WUD1 216 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 KRTAP1-5Q9BYS1 174 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 Q9H8V8 135 aa16.67■□□□□ 0.26
USP47-205ENST00000525257 OR5I1Q13606 314 aa16.66■□□□□ 0.26
USP47-205ENST00000525257 A0A087X0K7 114 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 CDKN1BP46527 198 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 ZNF493Q6ZR52 646 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 TOMM5Q8N4H5 51 aa16.65■□□□□ 0.26
USP47-205ENST00000525257 RNASE8Q8TDE3 154 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms