RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 M0R3E3 92 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 LTAP01374 205 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 GP9P14770 177 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 GPR183P32249 361 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 IFI27P40305 119 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-202ENST00000524773 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-202ENST00000524773 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 FAM169BQ8N8A8 192 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 OR4C13Q8NGP0 309 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 FAM222BQ8WU58 562 aa10.5□□□□□ -0.73
CAPN1-202ENST00000524773 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-202ENST00000524773 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.49□□□□□ -0.73
CAPN1-202ENST00000524773 FAM231BA6NCW3 169 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 K7EMI3 77 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 CRXO43186 299 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-202ENST00000524773 RBP4P02753 201 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 MRGPRG-AS1Q2M3A8 158 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 NBASA2RRP1 2371 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
CAPN1-202ENST00000524773 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 TNFRSF1AP19438 455 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 RHOGP84095 191 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 Q86TA4 180 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 ZADH2Q8N4Q0 377 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 PRSS3P2Q8NHM4 247 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 ACACAQ13085 2346 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 LIPFP07098 398 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 MEGF9Q9H1U4 602 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 F11RQ9Y624 299 aaKnown RBP10.48□□□□□ -0.73
CAPN1-202ENST00000524773 ZGRF1Q86YA3 2104 aa10.48□□□□□ -0.73
CAPN1-202ENST00000524773 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
CAPN1-202ENST00000524773 C8orf49Q96NF6 230 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 LINC00312Q9Y6C7 94 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 ABCA4P78363 2273 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 IGLV3-9A0A075B6K5 115 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 IGLV2-11P01706 119 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.736e-7■□□□□ 8.8
CAPN1-202ENST00000524773 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 TTTY13Q9BZ97 58 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 AP5S1Q9NUS5 200 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 FAM215AQ9Y5M1 114 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 H3BUT2 72 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 OVOL3O00110 214 aa10.47□□□□□ -0.73
CAPN1-202ENST00000524773 KLF17Q5JT82 389 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-202ENST00000524773 IGHV3OR16-8A0A075B7F1 116 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 NBL1P41271 181 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 IGFL4Q6B9Z1 124 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 BPIFA4PQ86YQ2 179 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 CTSZQ9UBR2 303 aa10.46□□□□□ -0.73
CAPN1-202ENST00000524773 K7EM74 188 aa10.46□□□□□ -0.74
CAPN1-202ENST00000524773 CRIP1P50238 77 aa10.46□□□□□ -0.74
CAPN1-202ENST00000524773 ZNF747Q9BV97 191 aa10.46□□□□□ -0.74
CAPN1-202ENST00000524773 THYN1Q9P016 225 aa10.46□□□□□ -0.74
CAPN1-202ENST00000524773 RABAC1Q9UI14 185 aa10.46□□□□□ -0.74
CAPN1-202ENST00000524773 LYNX1G3V0Z9 82 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 LYNX1P0DP58 116 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 NHLH1Q02575 133 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 TMEM30BQ3MIR4 351 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 TIMM23BQ5SRD1 257 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 FA2HQ7L5A8 372 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 AMN1Q8IY45 258 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 FBXL15Q9H469 300 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 TRAV17A0A0B4J275 112 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 D6R8Y8 96 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 GOSR1O95249 250 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 CD40P25942 277 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 CACNG7P62955 275 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 NDFIP1Q9BT67 221 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 TMEM133Q9H2Q1 129 aa10.45□□□□□ -0.74
CAPN1-202ENST00000524773 A0A096LNJ9 63 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 GATA4P43694 442 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 HIST1H1AQ02539 215 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-202ENST00000524773 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-202ENST00000524773 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 TM4SF5O14894 197 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 COX7A1P24310 79 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 NMUP48645 174 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 TMEM97Q5BJF2 176 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 CELSR1Q9NYQ6 3014 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms