RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 RNF212Q495C1 297 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 SPANXN5Q5MJ07 72 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
HIF3A-208ENST00000524533 SLC25A21Q9BQT8 299 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-208ENST00000524533 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
HIF3A-208ENST00000524533 INSP01308 110 aa11.53□□□□□ -0.56
HIF3A-208ENST00000524533 HOXB5P09067 269 aa11.53□□□□□ -0.56
HIF3A-208ENST00000524533 CNN1P51911 297 aaKnown RBP11.53□□□□□ -0.56
HIF3A-208ENST00000524533 Q6ZR54 194 aa11.53□□□□□ -0.56
HIF3A-208ENST00000524533 ACOT7LQ6ZUV0 252 aa11.53□□□□□ -0.56
HIF3A-208ENST00000524533 M0R2Z0 102 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-208ENST00000524533 OR11H7Q8NGC8 314 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 DEDD2Q8WXF8 326 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
HIF3A-208ENST00000524533 V9GYH0 126 aa11.52□□□□□ -0.57
HIF3A-208ENST00000524533 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 SMCO3A2RU48 225 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 H3BRN7 92 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 FGL1Q08830 312 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 RNF182Q8N6D2 247 aa11.51□□□□□ -0.57
HIF3A-208ENST00000524533 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
HIF3A-208ENST00000524533 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-208ENST00000524533 TMEM144Q7Z5S9 345 aa11.5□□□□□ -0.57
HIF3A-208ENST00000524533 BAP18Q8IXM2 172 aa11.5□□□□□ -0.57
HIF3A-208ENST00000524533 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
HIF3A-208ENST00000524533 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
HIF3A-208ENST00000524533 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-208ENST00000524533 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 LYRM9A8MSI8 78 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 CRXO43186 299 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-208ENST00000524533 IL5P05113 134 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 RAP2BP61225 183 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 B2MP61769 119 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 HIGD1AQ9Y241 93 aa11.49□□□□□ -0.57
HIF3A-208ENST00000524533 DYNC1H1Q14204 4646 aaKnown RBP11.48□□□□□ -0.57
HIF3A-208ENST00000524533 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 ADAP1O75689 374 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 PRM2P04554 102 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 LINC00869P0C866 280 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
HIF3A-208ENST00000524533 TSPOP30536 169 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 S100A5P33763 92 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-208ENST00000524533 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
HIF3A-208ENST00000524533 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
HIF3A-208ENST00000524533 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 SSSCA1O60232 199 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 HYPMO75409 117 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 OR5G3P0C626 314 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 POLR2GP62487 172 aaKnown RBP eCLIP11.47□□□□□ -0.57
HIF3A-208ENST00000524533 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-208ENST00000524533 PSENENQ9NZ42 101 aa11.47□□□□□ -0.57
HIF3A-208ENST00000524533 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 PLP1P60201 277 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 SELENOTP62341 195 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 RHOBP62745 196 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 ID3Q02535 119 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 S100A7AQ86SG5 101 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 UHRF2Q96PU4 802 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
HIF3A-208ENST00000524533 A0A087X0K7 114 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 CXCL3P19876 107 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 RRAS2P62070 204 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-208ENST00000524533 CCDC190Q86UF4 302 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 ZNF575Q86XF7 245 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 TMEM256Q8N2U0 113 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
HIF3A-208ENST00000524533 PLAC8L1A1L4L8 177 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 CCDC160A6NGH7 325 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 PMS2P5A8MQ11 134 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 F5H768 121 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 CCNKO75909 580 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 ATP5G1P05496 136 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 AZU1P20160 251 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 ATP5G3P48201 142 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 INPP1P49441 399 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 DLK1P80370 383 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 PSG3Q16557 428 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 LINC01587Q99440 93 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 ARL6Q9H0F7 186 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 MGAT4CQ9UBM8 478 aa11.44□□□□□ -0.58
HIF3A-208ENST00000524533 RYR1P21817 5038 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 NDUFB6O95139 128 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 SCGB1D2O95969 90 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 NUDT3O95989 172 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms