RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ID1P41134 155 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 RPL29P47914 159 aaKnown RBP9.25□□□□□ -0.93
CCNC-216ENST00000523961 MEOX2P50222 304 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 PSMG4Q5JS54 123 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 MIC13Q5XKP0 118 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 PATE2Q6UY27 113 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 Q6ZRG5 221 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 ASB13Q8WXK3 278 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 SCRT1Q9BWW7 348 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 ARV1Q9H2C2 271 aa9.25□□□□□ -0.93
CCNC-216ENST00000523961 COX7A2P2O60397 106 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
CCNC-216ENST00000523961 LYL1P12980 280 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 RPL12P30050 165 aaKnown RBP9.24□□□□□ -0.93
CCNC-216ENST00000523961 PSMB3P49720 205 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 CLINT1Q14677 625 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 OPCMLQ14982 345 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 Q6ZWC4 215 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 STHQ8IWL8 128 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 CSTL1Q9H114 145 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 RETNQ9HD89 108 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 HSPB11Q9Y547 144 aa9.24□□□□□ -0.93
CCNC-216ENST00000523961 ISLRO14498 428 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 SOCS3O14543 225 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
CCNC-216ENST00000523961 B2MP61769 119 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 FGL1Q08830 312 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 PFDN5Q99471 154 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 ATP5SQ99766 215 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 DNAJC4Q9NNZ3 241 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 SLC39A9Q9NUM3 307 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 PXMP4Q9Y6I8 212 aa9.23□□□□□ -0.93
CCNC-216ENST00000523961 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 TRPT1Q86TN4 253 aaKnown RBP9.22□□□□□ -0.93
CCNC-216ENST00000523961 ZNF709Q8N972 641 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 TMEM37Q8WXS4 190 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 C16orf92Q96LL3 132 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 WDR61Q9GZS3 305 aaKnown RBP9.22□□□□□ -0.93
CCNC-216ENST00000523961 KCNIP2Q9NS61 270 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
CCNC-216ENST00000523961 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.93
CCNC-216ENST00000523961 SPRY2O43597 315 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 IFNA5P01569 189 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 DEFB135Q30KP9 77 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 MORN3Q6PF18 240 aaPredicted RBP9.21□□□□□ -0.94
CCNC-216ENST00000523961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.94
CCNC-216ENST00000523961 A0A087X0K7 114 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 SPP1P10451 314 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 SCGB1C1Q8TD33 95 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 RNF183Q96D59 192 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 C17orf77Q96MU5 243 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 SMIM3Q9BZL3 60 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
CCNC-216ENST00000523961 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 H3BMM0 161 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
CCNC-216ENST00000523961 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
CCNC-216ENST00000523961 HLA-DRB4P13762 266 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 MORN5Q5VZ52 161 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 LRRC20Q8TCA0 184 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 AQP10Q96PS8 301 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
CCNC-216ENST00000523961 EDA2RQ9HAV5 297 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 HLA-DRB4X5D2U9 266 aa9.19□□□□□ -0.94
CCNC-216ENST00000523961 AGRNO00468 2067 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 CXCL2P19875 107 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 NUTF2P61970 127 aaKnown RBP9.18□□□□□ -0.94
CCNC-216ENST00000523961 Q5BKY6 102 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 EBLN2Q6P2I7 272 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 LCN15Q6UWW0 184 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
CCNC-216ENST00000523961 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
CCNC-216ENST00000523961 TRAV8-2A0A0B4J237 113 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 INO80EQ8NBZ0 244 aaPredicted RBP9.17□□□□□ -0.94
CCNC-216ENST00000523961 C20orf173Q96LM9 149 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 CLUHP3Q96NS8 147 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 WFDC1Q9HC57 220 aa9.17□□□□□ -0.94
CCNC-216ENST00000523961 HUWE1Q7Z6Z7 4374 aaKnown RBP9.17□□□□□ -0.94
CCNC-216ENST00000523961 FXYD6-FXYD2A0A087WZ82 144 aa9.16□□□□□ -0.94
CCNC-216ENST00000523961 A0A0J9YX75 114 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms