RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 H3BRN7 92 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 CCSO14618 274 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 GOSR2O14653 212 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 LINC00869P0C866 280 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 TCTAP57738 103 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 IL15RAQ13261 267 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 RAB31Q13636 194 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 NEU1Q99519 415 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 CLEC5AQ9NY25 188 aa12.52□□□□□ -0.41
CCNC-213ENST00000523541 AGRNO00468 2067 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 SMIM9A6NGZ8 99 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 C11orf94C9JXX5 98 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 PRAF2O60831 178 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 CCNKO75909 580 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 S100A11P31949 105 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 LSM5Q9Y4Y9 91 aaKnown RBP12.51□□□□□ -0.41
CCNC-213ENST00000523541 X6R8D5 127 aa12.51□□□□□ -0.41
CCNC-213ENST00000523541 ELOA3CA0A087WX78 387 aaPredicted RBP12.5□□□□□ -0.41
CCNC-213ENST00000523541 OR5G3P0C626 314 aa12.5□□□□□ -0.41
CCNC-213ENST00000523541 BCAP31P51572 246 aa12.5□□□□□ -0.41
CCNC-213ENST00000523541 CAV2P51636 162 aa12.5□□□□□ -0.41
CCNC-213ENST00000523541 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
CCNC-213ENST00000523541 C11orf1Q9H5F2 150 aa12.5□□□□□ -0.41
CCNC-213ENST00000523541 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
CCNC-213ENST00000523541 IGHV4-28A0A0C4DH34 117 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 A0A0J9YX75 114 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 AGPAT2O15120 278 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 PSG9Q00887 426 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 SLC38A11Q08AI6 406 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 ATP6V1FQ16864 119 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 ZNF705AQ6ZN79 300 aaPredicted RBP12.49□□□□□ -0.41
CCNC-213ENST00000523541 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 ARV1Q9H2C2 271 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
CCNC-213ENST00000523541 A0A087X0K7 114 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 A8MTW9 85 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 DUSP14O95147 198 aaKnown RBP12.48□□□□□ -0.41
CCNC-213ENST00000523541 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 RBMY1A1P0DJD3 496 aaKnown RBP12.48□□□□□ -0.41
CCNC-213ENST00000523541 RBMY1CP0DJD4 496 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 SULT1A1P50225 295 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 HBG1P69891 147 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 HBG2P69892 147 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
CCNC-213ENST00000523541 RBMY1FQ15415 496 aaKnown RBP12.48□□□□□ -0.41
CCNC-213ENST00000523541 GDF5OSQ5U4N7 250 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 Q6ZRG5 221 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 CHAC2Q8WUX2 184 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 DOK5Q9P104 306 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 HYDINQ4G0P3 5121 aa12.48□□□□□ -0.41
CCNC-213ENST00000523541 TMEM189A5PLL7 270 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 AMBPP02760 352 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 RLN2P04090 185 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 CXCL2P19875 107 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 DEFA1P59665 94 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 DEFA3P59666 94 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 VWC2Q2TAL6 325 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 FAM78BQ5VT40 261 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 STX12Q86Y82 276 aa12.47□□□□□ -0.41
CCNC-213ENST00000523541 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
CCNC-213ENST00000523541 ZNF705DP0CH99 300 aaPredicted RBP12.46□□□□□ -0.41
CCNC-213ENST00000523541 ZNF705BP0CI00 300 aaPredicted RBP12.46□□□□□ -0.41
CCNC-213ENST00000523541 CAMLGP49069 296 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 RAB32Q13637 225 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 LINC00305Q7Z4B0 112 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 TMEM252Q8N6L7 170 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 ZNF709Q8N972 641 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 MGST2Q99735 147 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 MARVELD1Q9BSK0 173 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 NMES1Q9C002 83 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 DNAJC4Q9NNZ3 241 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
CCNC-213ENST00000523541 INMT-MINDY4F8WBC2 141 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 COX7A2P2O60397 106 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 MPDU1O75352 247 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 CST7O76096 145 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 RPL29P47914 159 aaKnown RBP12.45□□□□□ -0.42
CCNC-213ENST00000523541 S100A10P60903 97 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 IFITM3Q01628 133 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 NRARPQ7Z6K4 114 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 BPIFA4PQ86YQ2 179 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 OR1L4Q8NGR5 311 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
CCNC-213ENST00000523541 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 FXYD7P58549 80 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 DEFB1P60022 68 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 B2MP61769 119 aa12.44□□□□□ -0.42
CCNC-213ENST00000523541 PRR20EP86478 221 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms