RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ORM2P19652 201 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 FGF7P21781 194 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 BMI1P35226 326 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 AP2S1P53680 142 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-210ENST00000521932 LYZP61626 148 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 ZNF266Q14584 549 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 OPCMLQ14982 345 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 CD300EQ496F6 205 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-210ENST00000521932 FAM90A2PQ658T7 463 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 PATE2Q6UY27 113 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 Q6ZRG5 221 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 KCNRGQ8N5I3 272 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 ST8SIA2Q92186 375 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 PBDC1Q9BVG4 233 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 SMIM3Q9BZL3 60 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
VPS13B-210ENST00000521932 A0A0D9SG52 128 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 C17orf112F2Z3M2 114 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 HYPMO75409 117 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 CXCL2P19875 107 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 S100A7P31151 101 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 B2MP61769 119 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 C1orf194Q5T5A4 169 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 MIC13Q5XKP0 118 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 LAMTOR1Q6IAA8 161 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 LCN12Q6JVE5 192 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 C16orf54Q6UWD8 224 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 OR1B1Q8NGR6 318 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 TMEM37Q8WXS4 190 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 NARS2Q96I59 477 aaKnown RBP6.27□□□□□ -1.41
VPS13B-210ENST00000521932 HYLS1Q96M11 299 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 RNF2Q99496 336 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 TMEM231Q9H6L2 316 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 DNAJC4Q9NNZ3 241 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
VPS13B-210ENST00000521932 IGHV3OR16-13A0A075B7E8 117 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 IGHV3-74A0A0B4J1X5 117 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 IZUMO1RA6ND01 250 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 ZNF98A6NK75 572 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 ZNF785A8K8V0 405 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 TSPAN4O14817 238 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 JTBO76095 146 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 CD300CQ08708 224 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 LGALSLQ3ZCW2 172 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-210ENST00000521932 RBPMS2Q6ZRY4 209 aaKnown RBP6.26□□□□□ -1.41
VPS13B-210ENST00000521932 TMEM61Q8N0U2 210 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 ZNF709Q8N972 641 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 GLMPQ8WWB7 406 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 GRAMD2BQ96HH9 432 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 SLC25A39Q9BZJ4 359 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-210ENST00000521932 ARL6Q9H0F7 186 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 KCNIP2Q9NS61 270 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 RNF24Q9Y225 148 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 TIMM9Q9Y5J7 89 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 PXMP4Q9Y6I8 212 aa6.26□□□□□ -1.41
VPS13B-210ENST00000521932 BORCS7-ASMTA0A0B4J1R7 106 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 IGHV3-66A0A0C4DH42 116 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 HELTA6NFD8 242 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 H3BRN7 92 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 OR5G3P0C626 314 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 GP9P14770 177 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 SERF2P84101 59 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 C10orf113Q5VZT2 155 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 RPL7L1Q6DKI1 246 aaKnown RBP6.25□□□□□ -1.41
VPS13B-210ENST00000521932 Q6ZSN1 163 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 LINC00305Q7Z4B0 112 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 OR1L4Q8NGR5 311 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 OR2G3Q8NGZ4 309 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 GATAD1Q8WUU5 269 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 GPR82Q96P67 336 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 UHRF2Q96PU4 802 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 PFDN5Q99471 154 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 SPAG8Q99932 426 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-210ENST00000521932 PSMG3Q9BT73 122 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-210ENST00000521932 SHANK2-AS3Q9BTD1 123 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 RSG1Q9BU20 258 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 DOK5Q9P104 306 aa6.25□□□□□ -1.41
VPS13B-210ENST00000521932 ZNF256Q9Y2P7 627 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-210ENST00000521932 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 NOTCH3Q9UM47 2321 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 A0A087WWL8 130 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 TRAV2A0A0B4J234 112 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 COX7A2P2O60397 106 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 ATP6V0CP27449 155 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 PAFAH1B2P68402 229 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 SIGLEC15Q6ZMC9 328 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 TMUB2Q71RG4 321 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
VPS13B-210ENST00000521932 GNPNAT1Q96EK6 184 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms