RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 INO80EQ8NBZ0 244 aaPredicted RBP6.2□□□□□ -1.42
TRIM35-202ENST00000519219 OR1S2Q8NGQ3 325 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 NPIPB3Q92617 1050 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 NARS2Q96I59 477 aaKnown RBP6.2□□□□□ -1.42
TRIM35-202ENST00000519219 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 ENY2Q9NPA8 101 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 MBD2Q9UBB5 411 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 DKK2Q9UBU2 259 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 HSPB11Q9Y547 144 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 HLA-DRB4X5D2U9 266 aa6.2□□□□□ -1.42
TRIM35-202ENST00000519219 F6UB75 175 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 BUB3O43684 328 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 MPC2O95563 127 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 PRM2P04554 102 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 NPY1RP25929 384 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 NKX2-1P43699 371 aaPredicted RBP6.19□□□□□ -1.42
TRIM35-202ENST00000519219 AP2S1P53680 142 aaPredicted RBP6.19□□□□□ -1.42
TRIM35-202ENST00000519219 SPCS3P61009 180 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
TRIM35-202ENST00000519219 TNP2Q05952 138 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 AARDQ4LEZ3 155 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF546Q86UE3 836 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 C1orf158Q8N1D5 194 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 Q8WTZ3 238 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 ACY3Q96HD9 319 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 NEU1Q99519 415 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 CACNG5Q9UF02 275 aa6.19□□□□□ -1.42
TRIM35-202ENST00000519219 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 TRAV30A0A087WSZ9 112 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 RPS10-NUDT3A0A1W2PQS6 291 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 KANTRA0A1W2PQU2 76 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 HMSDA8MTL9 139 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SOCS3O14543 225 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SSSCA1O60232 199 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 TOMM40O96008 361 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 PSG1P11464 419 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SLC25A4P12235 298 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SLC25A6P12236 298 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 HTR2BP41595 481 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
TRIM35-202ENST00000519219 C2orf83Q53S99 150 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 Q5BKY6 102 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 NMSQ5H8A3 153 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 TMEM88Q6PEY1 159 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 C9orf62Q8N4C0 152 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SLC24A4Q8NFF2 622 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 NIPSNAP3BQ9BS92 247 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 C1QTNF4Q9BXJ3 329 aa6.18□□□□□ -1.42
TRIM35-202ENST00000519219 SAV1Q9H4B6 383 aaPredicted RBP6.18□□□□□ -1.42
TRIM35-202ENST00000519219 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
TRIM35-202ENST00000519219 RCL1Q9Y2P8 373 aaKnown RBP6.18□□□□□ -1.42
TRIM35-202ENST00000519219 YTHDF2Q9Y5A9 579 aaKnown RBP6.18□□□□□ -1.42
TRIM35-202ENST00000519219 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 A0A0D9SG52 128 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 E5RGE8 158 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 K7EPK0 472 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 MED6O75586 246 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 MBPP02686 304 aaPredicted RBP6.17□□□□□ -1.42
TRIM35-202ENST00000519219 RD3LP0DJH9 198 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 NUTF2P61970 127 aaKnown RBP6.17□□□□□ -1.42
TRIM35-202ENST00000519219 ZNF90Q03938 601 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 C1orf134Q5TEV5 83 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 OR11H4Q8NGC9 324 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 OR4D5Q8NGN0 318 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 OR52E5Q8NH55 327 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
TRIM35-202ENST00000519219 PBDC1Q9BVG4 233 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 ARL6Q9H0F7 186 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 MAGT1Q9H0U3 335 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
TRIM35-202ENST00000519219 OR5AC2Q9NZP5 309 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 RFNGQ9Y644 331 aa6.17□□□□□ -1.42
TRIM35-202ENST00000519219 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
TRIM35-202ENST00000519219 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 G3V3Q6 166 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 SCGB2A1O75556 95 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 S100A11P31949 105 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 CAV2P51636 162 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 POLR2GP62487 172 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRIM35-202ENST00000519219 OR2F1Q13607 317 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 FAM78BQ5VT40 261 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 FOXI2Q6ZQN5 318 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 ACOT7LQ6ZUV0 252 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 TMUB2Q71RG4 321 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 RNF125Q96EQ8 232 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 C17orf77Q96MU5 243 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 SEPSECSQ9HD40 501 aaKnown RBP6.16□□□□□ -1.42
TRIM35-202ENST00000519219 CACFD1Q9UGQ2 172 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 PAIP2BQ9ULR5 123 aaKnown RBP6.16□□□□□ -1.42
TRIM35-202ENST00000519219 TNFSF18Q9UNG2 199 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 BOLA1Q9Y3E2 137 aa6.16□□□□□ -1.42
TRIM35-202ENST00000519219 TMEM189A5PLL7 270 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms