RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 SDHCQ99643 169 aaPredicted RBP11.29□□□□□ -0.6
MRPS28-204ENST00000519120 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
MRPS28-204ENST00000519120 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
MRPS28-204ENST00000519120 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
MRPS28-204ENST00000519120 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
MRPS28-204ENST00000519120 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
MRPS28-204ENST00000519120 FRAS1Q86XX4 4008 aa11.29□□□□□ -0.6
MRPS28-204ENST00000519120 TSC22D2O75157 780 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 DUSP14O95147 198 aaKnown RBP11.28□□□□□ -0.6
MRPS28-204ENST00000519120 HBE1P02100 147 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 P0DMU3 169 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
MRPS28-204ENST00000519120 FXYD7P58549 80 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 RAP2BP61225 183 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 C1orf158Q8N1D5 194 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
MRPS28-204ENST00000519120 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 SSSCA1O60232 199 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 HYPMO75409 117 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 IL7P13232 177 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-204ENST00000519120 OR10P1Q8NGE3 313 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 MITD1Q8WV92 249 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 NPVFQ9HCQ7 196 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
MRPS28-204ENST00000519120 A0A087X0K7 114 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 LINC00869P0C866 280 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
MRPS28-204ENST00000519120 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-204ENST00000519120 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 GGACTQ9BVM4 153 aa11.26□□□□□ -0.61
MRPS28-204ENST00000519120 DNAH10Q8IVF4 4471 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 TRAV8-2A0A0B4J237 113 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 METTL15P1P0C7V9 234 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 CNN1P51911 297 aaKnown RBP11.25□□□□□ -0.61
MRPS28-204ENST00000519120 EMP1P54849 157 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 B2MP61769 119 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 TEPPQ6URK8 271 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 MGAT4CQ9UBM8 478 aa11.25□□□□□ -0.61
MRPS28-204ENST00000519120 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 CCNKO75909 580 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 OR5G3P0C626 314 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 GSG1LQ6UXU4 331 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 LINC00336Q6ZUF6 198 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 ZNF546Q86UE3 836 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 OR11H7Q8NGC8 314 aa11.24□□□□□ -0.61
MRPS28-204ENST00000519120 RCL1Q9Y2P8 373 aaKnown RBP11.24□□□□□ -0.61
MRPS28-204ENST00000519120 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
MRPS28-204ENST00000519120 SCGB1D2O95969 90 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 CXCL2P19875 107 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 TSPOP30536 169 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 RRAS2P62070 204 aaPredicted RBP11.23□□□□□ -0.61
MRPS28-204ENST00000519120 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 C20orf85Q9H1P6 137 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 NDUFA13Q9P0J0 144 aa11.23□□□□□ -0.61
MRPS28-204ENST00000519120 C7orf66A4D0T2 115 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 PLA2G10O15496 165 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-204ENST00000519120 INSP01308 110 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
MRPS28-204ENST00000519120 CXCL3P19876 107 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 FGL1Q08830 312 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 RNF182Q8N6D2 247 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 ZNF738Q8NE65 137 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 ARL6Q9H0F7 186 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 GSKIPQ9P0R6 139 aa11.22□□□□□ -0.61
MRPS28-204ENST00000519120 BOLA2-SMG1P6H3BVE0 249 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 GOSR2O14653 212 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
MRPS28-204ENST00000519120 LYRM1O43325 122 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 PSG3Q16557 428 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 PATE2Q6UY27 113 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.61
MRPS28-204ENST00000519120 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 LYRM9A8MSI8 78 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 M0R2Z0 102 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 AGPAT2O15120 278 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 DAD1P61803 113 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
MRPS28-204ENST00000519120 LCN15Q6UWW0 184 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms