RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 K7EMT4 169 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 NDUFA4O00483 81 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 ADMP35318 185 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 CAMLGP49069 296 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 WT1-ASQ06250 92 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 SPSB3Q6PJ21 355 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 LINC00336Q6ZUF6 198 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 C20orf24Q9BUV8 137 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 TIMM9Q9Y5J7 89 aa13.92□□□□□ -0.18
CTNNA1-213ENST00000519113 DNAH6Q9C0G6 4158 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 FNDC10F2Z333 226 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 C17orf112F2Z3M2 114 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 ATP6V0BQ99437 205 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 RSG1Q9BU20 258 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 WDR83OSQ9Y284 106 aa13.91□□□□□ -0.18
CTNNA1-213ENST00000519113 MPDU1O75352 247 aa13.9□□□□□ -0.18
CTNNA1-213ENST00000519113 SERF2P84101 59 aa13.9□□□□□ -0.18
CTNNA1-213ENST00000519113 Q6ZRG5 221 aa13.9□□□□□ -0.18
CTNNA1-213ENST00000519113 RNASEH2CQ8TDP1 164 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-213ENST00000519113 NPVFQ9HCQ7 196 aa13.9□□□□□ -0.18
CTNNA1-213ENST00000519113 IGLL5B9A064 214 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 C11orf94C9JXX5 98 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 MED14OSP0DP75 135 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 S100A1P23297 94 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 MFAP2P55001 183 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 PXDC1Q5TGL8 231 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 DPPA3Q6W0C5 159 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 ZNF114Q8NC26 417 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 FAM213BQ8TBF2 198 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 APLNQ9ULZ1 77 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 RFNGQ9Y644 331 aa13.89□□□□□ -0.19
CTNNA1-213ENST00000519113 AKR1C1Q04828 323 aa13.88□□□□□ -0.19
CTNNA1-213ENST00000519113 RAB31Q13636 194 aa13.88□□□□□ -0.19
CTNNA1-213ENST00000519113 NPCDR1Q9BY65 106 aa13.88□□□□□ -0.19
CTNNA1-213ENST00000519113 SMPXQ9UHP9 88 aa13.88□□□□□ -0.19
CTNNA1-213ENST00000519113 PKHD1P08F94 4074 aa13.88□□□□□ -0.19
CTNNA1-213ENST00000519113 ZNF207O43670 478 aaKnown RBP13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 MBP02144 154 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 ZNF124Q15973 351 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 ETFRF1Q6IPR1 90 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 OR1P1Q8NH06 330 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 HRH4Q9H3N8 390 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 C21orf62Q9NYP8 219 aa13.87□□□□□ -0.19
CTNNA1-213ENST00000519113 IGHV3OR16-8A0A075B7F1 116 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 CORTO00230 105 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 DEFB4AO15263 64 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 PVRIGQ6DKI7 326 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 TEPPQ6URK8 271 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 RNF2Q99496 336 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 KCNIP2Q9NS61 270 aa13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 F11RQ9Y624 299 aaKnown RBP13.86□□□□□ -0.19
CTNNA1-213ENST00000519113 TEX46H3BTG2 121 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 CA1P00915 261 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 OPRK1P41145 380 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 TFPI2P48307 235 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 FHITP49789 147 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 FFAR4Q5NUL3 377 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 TMEM144Q7Z5S9 345 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 TMEM116Q8NCL8 245 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 RHPN1-AS1Q9BWJ2 59 aa13.85□□□□□ -0.19
CTNNA1-213ENST00000519113 IGHV7-4-1A0A0J9YVY3 117 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 CHEK1O14757 476 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 RAB2AP61019 212 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 GAMTQ14353 236 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 Q56UQ5 140 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 MGST2Q99735 147 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 FAT2Q9NYQ8 4349 aa13.84□□□□□ -0.19
CTNNA1-213ENST00000519113 IGHV3-21A0A0B4J1V1 117 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 A0A1B0GVY2 172 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 RAB19A4D1S5 217 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 H2AFB1P0C5Y9 115 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 MLANAQ16655 118 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 ACOT6Q3I5F7 207 aaPredicted RBP13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 RPRMQ9NS64 109 aa13.83□□□□□ -0.2
CTNNA1-213ENST00000519113 DNAH2Q9P225 4427 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 IGKV3-7A0A075B6H7 116 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 F8W735 103 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 AGPAT2O15120 278 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 HBE1P02100 147 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 EIF4E3Q8N5X7 224 aaKnown RBP13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 LYPD6BQ8NI32 183 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
CTNNA1-213ENST00000519113 NUPL2O15504 423 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 YIF1AO95070 293 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 CD5P06127 495 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 CTSGP08311 255 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 UQCC3Q6UW78 93 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 GBGT1Q8N5D6 347 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 OR10G4Q8NGN3 311 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 ACY3Q96HD9 319 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms