RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GNPNAT1Q96EK6 184 aaPredicted RBP7.4□□□□□ -1.22
CLN8-202ENST00000517514 PFDN5Q99471 154 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 RPRMQ9NS64 109 aa7.4□□□□□ -1.22
CLN8-202ENST00000517514 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
CLN8-202ENST00000517514 PRKDCP78527 4128 aaKnown RBP7.4□□□□□ -1.23
CLN8-202ENST00000517514 TRAV25A0A0B4J276 109 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 SOCS3O14543 225 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 GP9P14770 177 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 M6PRP20645 277 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 SERF2P84101 59 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 FAM78BQ5VT40 261 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 SIGLEC15Q6ZMC9 328 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 BAP18Q8IXM2 172 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 GBGT1Q8N5D6 347 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 DCANP1Q8TF63 244 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 MS4A6AQ9H2W1 248 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 SLC25A22Q9H936 323 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 KCNIP2Q9NS61 270 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 FUT9Q9Y231 359 aa7.39□□□□□ -1.23
CLN8-202ENST00000517514 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 H3BQ15 152 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 K7EQG2 157 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
CLN8-202ENST00000517514 SEC11BP0C7V7 166 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 IGLC2P0DOY2 106 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 TPT1P13693 172 aaKnown RBP7.38□□□□□ -1.23
CLN8-202ENST00000517514 ACOT6Q3I5F7 207 aaPredicted RBP7.38□□□□□ -1.23
CLN8-202ENST00000517514 LCN12Q6JVE5 192 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 FAM122CQ6P4D5 195 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 OR8I2Q8N0Y5 310 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 Q8N1Y9 231 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 OR10G4Q8NGN3 311 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 OR10G7Q8NGN6 311 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 TMED6Q8WW62 240 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 PPP1R14BQ96C90 147 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 PRR25Q96S07 402 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 TMEM231Q9H6L2 316 aa7.38□□□□□ -1.23
CLN8-202ENST00000517514 A0A087X0K7 114 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 PRB2P02812 416 aaPredicted RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 CD7P09564 240 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 PYYP10082 97 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 FHITP49789 147 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 TMEM41BQ5BJD5 291 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 FXYD5Q96DB9 178 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 SAT2Q96F10 170 aaPredicted RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 GRAMD2BQ96HH9 432 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 NARS2Q96I59 477 aaKnown RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 SPAG8Q99932 426 aaPredicted RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
CLN8-202ENST00000517514 ZNF586Q9NXT0 402 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 TMEM14CQ9P0S9 112 aa7.37□□□□□ -1.23
CLN8-202ENST00000517514 AGRNO00468 2067 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 TRAV2A0A0B4J234 112 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 HELTA6NFD8 242 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 H3BTX0 84 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 SLC17A3O00476 420 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 HMGB3O15347 200 aaKnown RBP7.36□□□□□ -1.23
CLN8-202ENST00000517514 NDUFB4O95168 129 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 RPL7P18124 248 aaKnown RBP7.36□□□□□ -1.23
CLN8-202ENST00000517514 HLA-DMBP28068 263 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 BMI1P35226 326 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 TFPI2P48307 235 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 RHOBP62745 196 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 GUCA2BQ16661 112 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 ODF3L2Q3SX64 289 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 RBPMS2Q6ZRY4 209 aaKnown RBP7.36□□□□□ -1.23
CLN8-202ENST00000517514 WFDC3Q8IUB2 231 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 STXBP6Q8NFX7 210 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 RAB24Q969Q5 203 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 WFDC10AQ9H1F0 79 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 NRN1Q9NPD7 142 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 PFDN2Q9UHV9 154 aa7.36□□□□□ -1.23
CLN8-202ENST00000517514 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
CLN8-202ENST00000517514 K7EIL1 84 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 MBP02144 154 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 CD5P06127 495 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 STAG3L2P0CL84 134 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 STAG3L3P0CL85 134 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 GALR1P47211 349 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 CDC34P49427 236 aaPredicted RBP7.35□□□□□ -1.23
CLN8-202ENST00000517514 SULT1A2P50226 295 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 RPL11P62913 178 aaKnown RBP7.35□□□□□ -1.23
CLN8-202ENST00000517514 ZNF124Q15973 351 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 FAM74A1Q5RGS3 127 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 SUN5Q8TC36 379 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 GPR82Q96P67 336 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 CITED4Q96RK1 184 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
CLN8-202ENST00000517514 AURKAIP1Q9NWT8 199 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms