RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 MRPL36Q9P0J6 103 aaKnown RBP-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 COMMD3Q9UBI1 195 aa-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 C3orf18Q9UK00 162 aa-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 NXT1Q9UKK6 140 aaKnown RBP-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 PXMP4Q9Y6I8 212 aa-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 AP1M2Q9Y6Q5 423 aa-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 TSC2P49815 1807 aa-1.33□□□□□ -2.62
SNORA40.17-201ENST00000517256 ADGRB1O14514 1584 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 SIPA1L3O60292 1781 aaPredicted RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 C5orf42Q9H799 3197 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TRAV27A0A087WT01 109 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TRAV17A0A0B4J275 112 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 HIGD1CA8MV81 97 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 hCG_2039718K7EN88 272 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 COX6B1P14854 86 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 KCNE1P15382 129 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 GCHFRP30047 84 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 PHBP35232 272 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 ARR3P36575 388 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 SULT1A1P50225 295 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 IFITM2Q01629 132 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 INSL4Q14641 139 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 SYCP1Q15431 976 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 EXOC3L4Q17RC7 722 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 CARD17Q5XLA6 110 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 CLEC6AQ6EIG7 209 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 RPL22L1Q6P5R6 122 aaKnown RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 UNQ5815/PRO19632Q6UWF5 114 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 PDZD9Q8IXQ8 264 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 BOD1L2Q8IYS8 172 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 BLIDQ8IZY5 108 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 UBL4BQ8N7F7 174 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 DEFB105AQ8NG35 78 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 GPR32P1Q8NGA4 272 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 OR13C4Q8NGS5 318 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 OR2T10Q8NGZ9 312 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 MCFD2Q8NI22 146 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 ROPN1LQ96C74 230 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 ANKRD36BP1Q96IX9 119 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 PACRGQ96M98 296 aaPredicted RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 SDF2Q99470 211 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TMEM208Q9BTX3 173 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 WDR61Q9GZS3 305 aaKnown RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TMEM126AQ9H061 195 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 C11orf68Q9H3H3 251 aaKnown RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TMBIM4Q9HC24 238 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 TP53AIP1Q9HCN2 124 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 LY96Q9Y6Y9 160 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 RIMBP3CA6NJZ7 1639 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 RIMBP3BA6NNM3 1639 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 RIMBP3Q9UFD9 1639 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 ACACBO00763 2458 aa-1.34□□□□□ -2.62
SNORA40.17-201ENST00000517256 REV3LO60673 3130 aa-1.35□□□□□ -2.62
SNORA40.17-201ENST00000517256 DOCK1Q14185 1865 aa-1.35□□□□□ -2.62
SNORA40.17-201ENST00000517256 GOLGA3Q08378 1498 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 TRRAPQ9Y4A5 3859 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 A0A096LPI6 279 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 DUXBA0A1W2PPF3 345 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 F5H5K5 113 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 NDUFS8O00217 210 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 SLC16A4O15374 487 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 IGF2P01344 180 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 LINC00614P0C842 121 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 LIMS3P0CW19 117 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 LIMS4P0CW20 117 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 PYYP10082 97 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 RANBP1P43487 201 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 RPL5P46777 297 aaKnown RBP-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 DSTNP60981 165 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 VSNL1P62760 191 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 NEDD8Q15843 81 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 RAB11BQ15907 218 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 CENPQQ7L2Z9 268 aaPredicted RBP-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 S100A7AQ86SG5 101 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 FUNDC1Q8IVP5 155 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 LINC00269Q8N2A0 174 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 STAG3L4Q8TBR4 150 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 AGR3Q8TD06 166 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 CIB1Q99828 191 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 LZTFL1Q9NQ48 299 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 EURLQ9NYK6 297 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 FBXO5Q9UKT4 447 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 BLOC1S6Q9UL45 172 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 FMN1Q68DA7 1419 aa-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 MED1Q15648 1581 aaPredicted RBP-1.35□□□□□ -2.63
SNORA40.17-201ENST00000517256 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 HECW1Q76N89 1606 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 CASZ1Q86V15 1759 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 KIDINS220Q9ULH0 1771 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 GOLGA8QA0A0J9YX86 632 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 TRBV6-1A0A0K0K1D8 114 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 A0A1B0GW64 132 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 TMEM14DPA8MWL7 114 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 A8MWV9 139 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 IGKCP01834 107 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 ISG15P05161 165 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 MT1GP13640 62 aa-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 BLMP54132 1417 aaPredicted RBP-1.36□□□□□ -2.63
SNORA40.17-201ENST00000517256 TAS2R41P59536 307 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms