RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 OSR1Q8TAX0 266 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM170AQ8WVE7 144 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 MBD3L1Q8WWY6 194 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 LEAP2Q969E1 77 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 MOB3AQ96BX8 217 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 FLYWCH2Q96CP2 140 aaKnown RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 EAF1Q96JC9 268 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ATG101Q9BSB4 218 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ELOVL1Q9BW60 279 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 EIF5A2Q9GZV4 153 aaKnown RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 SRD5A3Q9H8P0 318 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 LYRM2Q9NU23 88 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 OR1A1Q9P1Q5 309 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 C14orf166Q9Y224 244 aaKnown RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 MOB4Q9Y3A3 225 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 WASHC3Q9Y3C0 194 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 WSB1Q9Y6I7 421 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 URGCP-MRPS24S4R325 110 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHV3-43A0A0B4J1X8 118 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 M0R1X1 148 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 NBR2O15453 112 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 ST8SIA3O43173 380 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SOX15O60248 233 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 DFFBO76075 338 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 CDS2O95674 445 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SCGB1D2O95969 90 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 HRASP01112 189 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGKV1D-33P01593 117 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGKV1-33P01594 117 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGLV2-14P01704 120 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHV3-7P01780 117 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHG2P01859 326 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 HLA-DRB1P01911 266 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 PRH1P02810 166 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 AMY1AP04745 511 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGHV3-43DP0DP04 118 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM11P17152 192 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 AADACP22760 399 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 G0S2P27469 103 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 GNRHRP30968 328 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 DUTP33316 252 aaKnown RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 BMI1P35226 326 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 ELLP55199 621 aaPredicted RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TAS2R30P59541 319 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 ARL16Q0P5N6 197 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM267Q0VDI3 215 aaPredicted RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 PNRC1Q12796 327 aaPredicted RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 CATR1Q13166 79 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 DIAPH2-AS1Q14236 149 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 GNMTQ14749 295 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 POU2AF1Q16633 256 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 C21orf62-AS1Q17RA5 79 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 C5orf64Q2M2E5 130 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 PHLDA2Q53GA4 152 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 UTF1Q5T230 341 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 C1orf194Q5T5A4 169 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 CYP2G1PQ6ZSU1 146 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM144Q7Z5S9 345 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 GTSCR1Q86UQ5 136 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SELENOHQ8IZQ5 122 aaKnown RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 LGI3Q8N145 548 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 GBGT1Q8N5D6 347 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM252Q8N6L7 170 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SLC35G3Q8N808 338 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 C5orf56Q8N8D9 126 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 Q8N976 141 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 Q8N9W7 124 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TEX45Q8NA69 505 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 OR51G1Q8NGK1 321 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2G3Q8NGZ4 309 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 OR4S2Q8NH73 311 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 OR4A5Q8NH83 315 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 ACY3Q96HD9 319 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM56Q96MV1 263 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 RASL11BQ9BPW5 248 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SLC25A33Q9BSK2 321 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM208Q9BTX3 173 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 CTDSP1Q9GZU7 261 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2D2Q9H210 308 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 SLC2A9Q9NRM0 540 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 RPRMQ9NS64 109 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 VAX2Q9UIW0 290 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 RNF150Q9ULK6 438 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TP53TG3Q9ULZ0 132 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 FUT9Q9Y231 359 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 RBM7Q9Y580 266 aaKnown RBP2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM56-RWDD3S4R434 201 aa2.28□□□□□ -2.04
SCARNA13-201ENST00000516672 IGKV1D-13A0A0B4J2D9 117 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 DUXBA0A1W2PPF3 345 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 XKRY2A2RUG3 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms