RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 AUNIPQ9H7T9 357 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 ODF2LQ9ULJ1 636 aa-3.34□□□□□ -2.94
RNU6-542P-201ENST00000516405 NINLQ9Y2I6 1382 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 A0A0J9YY10 115 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 A0A1B0GX78 115 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 C5orf49A4QMS7 147 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 NDUFS6O75380 124 aaKnown RBP-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 PYYP10082 97 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 H2BFSP57053 126 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 CDC42P60953 191 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 PIP5KL1Q5T9C9 394 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 FAM78BQ5VT40 261 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 RPL22L1Q6P5R6 122 aaKnown RBP-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 HAVCR2Q8TDQ0 301 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 HDHD2Q9H0R4 259 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 POPDC3Q9HBV1 291 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 OSTCQ9NRP0 149 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 RABL2AQ9UBK7 228 aaPredicted RBP-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 C3orf18Q9UK00 162 aa-3.35□□□□□ -2.95
RNU6-542P-201ENST00000516405 ZNF142P52746 1687 aaPredicted RBP-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 HECW1Q76N89 1606 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 TRBV10-3A0A0K0K1G6 114 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 MKRN2OSH3BPM6 223 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 K7EP34 96 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 K7EPI3 171 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 MT1BP07438 61 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 ELOF1P60002 83 aaKnown RBP-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 RPS24P62847 133 aaKnown RBP-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 LCN2P80188 198 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 C9orf62Q8N4C0 152 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 RBP7Q96R05 134 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 LYRM4Q9HD34 91 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 NXT1Q9UKK6 140 aaKnown RBP-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 LY96Q9Y6Y9 160 aa-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.36□□□□□ -2.95
RNU6-542P-201ENST00000516405 LRP6O75581 1613 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 TRAV27A0A087WT01 109 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 IGHV1-69-2A0A0G2JMI3 117 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 CENPXA8MT69 81 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 TMEM14DPA8MWL7 114 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 H0Y980 276 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 GMFGO60234 142 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 SPAG6O75602 509 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 FADS2O95864 444 aaKnown RBP-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 IGF2P01344 180 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 HMGB1P09429 215 aaKnown RBP-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 MT1GP13640 62 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 CXCL2P19875 107 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 CCL1P22362 96 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 DSTNP60981 165 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 GUK1Q16774 197 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 LPCAT3Q6P1A2 487 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 EIF1ADQ8N9N8 165 aaKnown RBP-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 SREK1IP1Q8N9Q2 155 aaPredicted RBP-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 MGARPQ8TDB4 240 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 ROPN1LQ96C74 230 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 ANKRD36BP1Q96IX9 119 aa-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 ZCCHC6Q5VYS8 1495 aaKnown RBP-3.37□□□□□ -2.95
RNU6-542P-201ENST00000516405 SLIT1O75093 1534 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 GOLGA6L7A0A1B0GV03 622 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 FABP7O15540 132 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 CXCL3P19876 107 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 SULT1A1P50225 295 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 AKR1D1P51857 326 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 H3F3AP84243 136 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 CCDC184Q52MB2 194 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 SSX9Q7RTT3 188 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 NIPSNAP1Q9BPW8 284 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 LINC00467Q9BRT7 94 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 MED10Q9BTT4 135 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 GEMIN7Q9H840 131 aaKnown RBP-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 PARVAQ9NVD7 372 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 DCCP43146 1447 aa-3.38□□□□□ -2.95
RNU6-542P-201ENST00000516405 DUXBA0A1W2PPF3 345 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 H0YGG7 62 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 NCR2O95944 276 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 KCNE1P15382 129 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 ANP32AP39687 249 aaKnown RBP-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 NEDD8Q15843 81 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 RAB11BQ15907 218 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 TMEM53Q6P2H8 277 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 S100A7AQ86SG5 101 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 FAM228AQ86W67 206 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 OR10D3Q8NH80 312 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 AGR3Q8TD06 166 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 POP5Q969H6 163 aaKnown RBP-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 PRADC1Q9BSG0 188 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 TRIM4Q9C037 500 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 LZTFL1Q9NQ48 299 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 BATF3Q9NR55 127 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 MRPL36Q9P0J6 103 aaKnown RBP-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 FAM135BQ49AJ0 1406 aa-3.39□□□□□ -2.95
RNU6-542P-201ENST00000516405 LRRIQ4A6NIV6 560 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 METTL15A6NJ78 407 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 M0R036 132 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 ACYP2P14621 99 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 UGT2B7P16662 529 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 TAS2R41P59536 307 aa-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 SPTAN1Q13813 2472 aaKnown RBP-3.4□□□□□ -2.95
RNU6-542P-201ENST00000516405 SYCP1Q15431 976 aa-3.4□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms