RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 DEKP35659 375 aaKnown RBP-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 RAB8AP61006 207 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 OR5AK3PQ8NH89 298 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 STOML3Q8TAV4 291 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 MRPL30Q8TCC3 161 aaKnown RBP-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 GNPDA2Q8TDQ7 276 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 PACRGQ96M98 296 aaPredicted RBP-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 NIPSNAP1Q9BPW8 284 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 MRPL35Q9NZE8 188 aaKnown RBP-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 DOCK5Q9H7D0 1870 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 MYO5AQ9Y4I1 1855 aaKnown RBP-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 RREB1Q92766 1687 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 DMXL1Q9Y485 3027 aa-3.46□□□□□ -2.96
SNORA40.13-201ENST00000516379 DISC1C4P0D8 188 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 WRBO00258 174 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 TMEM14EPQ6UXP3 125 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 ARPINQ7Z6K5 226 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 TRAPPC6BQ86SZ2 158 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 TIPINQ9BVW5 301 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 RSPH9Q9H1X1 276 aaPredicted RBP-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 C3orf18Q9UK00 162 aa-3.47□□□□□ -2.96
SNORA40.13-201ENST00000516379 DNAH1Q9P2D7 4330 aa-3.47□□□□□ -2.97
SNORA40.13-201ENST00000516379 RELNP78509 3460 aa-3.47□□□□□ -2.97
SNORA40.13-201ENST00000516379 PLXNA2O75051 1894 aa-3.47□□□□□ -2.97
SNORA40.13-201ENST00000516379 KIDINS220Q9ULH0 1771 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 NQO2P16083 231 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 VBP1P61758 197 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 Q6ZS49 121 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 CDRT4Q8N9R6 151 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 OR10K1Q8NGX5 313 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 JOSD2Q8TAC2 188 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 SMIM11BQ8TCY0 68 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 ADAT3Q96EY9 351 aaPredicted RBP-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 PRADC1Q9BSG0 188 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 MRPS26Q9BYN8 205 aaKnown RBP-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 RIMS2Q9UQ26 1411 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 CCDC168Q8NDH2 2452 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 MTORP42345 2549 aa-3.48□□□□□ -2.97
SNORA40.13-201ENST00000516379 APOBP04114 4563 aaKnown RBP-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 TRAV27A0A087WT01 109 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 A0A0A6YYH2 397 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 DAPL1A0PJW8 107 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 C9orf170A2RU37 121 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 A6NJ64 397 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 OR2J2O76002 312 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 KIAA1143Q96AT1 154 aaPredicted RBP-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 CNBD2Q96M20 576 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 HIST1H2BLQ99880 126 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 EXO5Q9H790 373 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 BIN3Q9NQY0 253 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 ITPR1Q14643 2758 aa-3.49□□□□□ -2.97
SNORA40.13-201ENST00000516379 A0A096LPI6 279 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 NDUFS8O00217 210 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 PIAS1O75925 651 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 SPINK8P0C7L1 97 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 CLDN8P56748 225 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 HIST2H3AQ71DI3 136 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 UBE2DNLQ8IWF7 75 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 LRRC25Q8N386 305 aaPredicted RBP-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 OR52E6Q96RD3 313 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 RGCCQ9H4X1 137 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 NXT1Q9UKK6 140 aaKnown RBP-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 KNL1Q8NG31 2342 aa-3.5□□□□□ -2.97
SNORA40.13-201ENST00000516379 ANK1P16157 1881 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 A8MWV9 139 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 TGOLN2O43493 480 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 NEMFO60524 1076 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 ADAP1O75689 374 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 IFNA10P01566 189 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 APODP05090 189 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 GYPBP06028 91 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 CXCR4P61073 352 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 MIR22HGQ0VDD5 57 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 EEF1AKMT1Q8WVE0 214 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 NAT8BQ9UHF3 227 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 SACSQ9NZJ4 4579 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 DLEC1Q9Y238 1755 aa-3.51□□□□□ -2.97
SNORA40.13-201ENST00000516379 DCCP43146 1447 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 A0A087X0T9 212 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 GOLGA6L7A0A1B0GV03 622 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 C17orf112F2Z3M2 114 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 BCAP31P51572 246 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 EIF5AP63241 154 aaKnown RBP-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 BLIDQ8IZY5 108 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 PLXNB2O15031 1838 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 ABCA13Q86UQ4 5058 aa-3.52□□□□□ -2.97
SNORA40.13-201ENST00000516379 SIPA1L3O60292 1781 aaPredicted RBP-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 UTP20O75691 2785 aaKnown RBP-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 SLC16A4O15374 487 aa-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 PTNP21246 168 aa-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 YPEL3P61236 119 aaPredicted RBP-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 CDC37Q16543 378 aaPredicted RBP-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 FBXO48Q5FWF7 155 aa-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 RIBC1Q8N443 379 aaPredicted RBP-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 TOMM6Q96B49 74 aa-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 CPDO75976 1380 aa-3.53□□□□□ -2.97
SNORA40.13-201ENST00000516379 BLMP54132 1417 aaPredicted RBP-3.53□□□□□ -2.98
SNORA40.13-201ENST00000516379 DYNC1H1Q14204 4646 aaKnown RBP-3.54□□□□□ -2.98
SNORA40.13-201ENST00000516379 HECW1Q76N89 1606 aa-3.54□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms