RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	FRMD6-AS1	P0C7T7	363 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	SELENOT	P62341	195 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	RPL11	P62913	178 aa	Known RBP	5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	GCSAML	Q5JQS6	135 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	LAMTOR1	Q6IAA8	161 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	SIGLEC15	Q6ZMC9	328 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	GTSCR1	Q86UQ5	136 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	STXBP6	Q8NFX7	210 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	OR11H4	Q8NGC9	324 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	DCANP1	Q8TF63	244 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	ST6GAL2	Q96JF0	529 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	AQP10	Q96PS8	301 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	SHANK2-AS3	Q9BTD1	123 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	RSG1	Q9BU20	258 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	ARV1	Q9H2C2	271 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	SLC25A22	Q9H936	323 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	TNFSF18	Q9UNG2	199 aa		5.79	□□□□□ -1.48
NR1I3-233	ENST00000515452	TRAV5	A0A0B4J249	113 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452		A0A1W2PS18	150 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	OR11H12	B2RN74	326 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	SOCS3	O14543	225 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	MRPS12	O15235	138 aa	Known RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	HYPM	O75409	117 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	CFD	P00746	253 aa	Predicted RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	BMI1	P35226	326 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	RPL29	P47914	159 aa	Known RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	AP2S1	P53680	142 aa	Predicted RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	B2M	P61769	119 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	CD300C	Q08708	224 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	FGL1	Q08830	312 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	APRG1	Q8IVJ8	170 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	ASB13	Q8WXK3	278 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	PPP1R14B	Q96C90	147 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	GRAMD2B	Q96HH9	432 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	NARS2	Q96I59	477 aa	Known RBP	5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	TMEM231	Q9H6L2	316 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	SRD5A3	Q9H8P0	318 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	MAP6D1	Q9H9H5	199 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	SLC39A9	Q9NUM3	307 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	HIGD1A	Q9Y241	93 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	PXMP4	Q9Y6I8	212 aa		5.78	□□□□□ -1.48
NR1I3-233	ENST00000515452	KIAA1109	Q2LD37	5005 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	FRAS1	Q86XX4	4008 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	PLEC	Q15149	4684 aa	Known RBP	5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	OR4C46	A6NHA9	309 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452		A8MZ25	164 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	ARPC5	O15511	151 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	EIF3G	O75821	320 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	SNRPC	P09234	159 aa	Known RBP	5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	ZNF688	P0C7X2	276 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	DEFB1	P60022	68 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	C1orf194	Q5T5A4	169 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	C10orf113	Q5VZT2	155 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	SPATA31B1P	Q5VZV4	182 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	LINC00305	Q7Z4B0	112 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	OR8I2	Q8N0Y5	310 aa		5.77	□□□□□ -1.49
NR1I3-233	ENST00000515452	TRAV2	A0A0B4J234	112 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	HELT	A6NFD8	242 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	DNASE2	O00115	360 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	COX7A2P2	O60397	106 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	MPDU1	O75352	247 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	CD5	P06127	495 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	PRB4	P10163	310 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	DEFB131A	P59861	70 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	RAB31	Q13636	194 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	LCE2A	Q5TA79	106 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	LCE2C	Q5TA81	110 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	PXDC1	Q5TGL8	231 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	IGFL4	Q6B9Z1	124 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	RPL7L1	Q6DKI1	246 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	C20orf173	Q96LM9	149 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	TM2D3	Q9BRN9	247 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	NRN1	Q9NPD7	142 aa		5.76	□□□□□ -1.49
NR1I3-233	ENST00000515452	TRAV8-2	A0A0B4J237	113 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	KNCN	A6PVL3	124 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452		H3BTX0	84 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	RPL35A	P18077	110 aa	Known RBP	5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	CXCL2	P19875	107 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	HLA-DMB	P28068	263 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	NUP62	P37198	522 aa	Predicted RBP	5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	PAFAH1B2	P68402	229 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	PSMG4	Q5JS54	123 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	FFAR4	Q5NUL3	377 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	GDF5OS	Q5U4N7	250 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452		Q6ZRG5	221 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	MIR17HG	Q75NE6	70 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	HSD17B11	Q8NBQ5	300 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	SCGB1C1	Q8TD33	95 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	FAM110A	Q9BQ89	295 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	MFF	Q9GZY8	342 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	SH3BGRL3	Q9H299	93 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	TUBA4B	Q9H853	241 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	SEPSECS	Q9HD40	501 aa	Known RBP	5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	RETN	Q9HD89	108 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	DNAJC4	Q9NNZ3	241 aa		5.75	□□□□□ -1.49
NR1I3-233	ENST00000515452	CYTL1	Q9NRR1	136 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms