RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 DEFA6Q01524 100 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 ZNF90Q03938 601 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 GAMTQ14353 236 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 PSG5Q15238 335 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 IQCJQ1A5X6 159 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 RPEL1Q2QD12 228 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 TIGITQ495A1 244 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 TMEM155Q4W5P6 130 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 GCSAMLQ5JQS6 135 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 FAM201AQ5SY85 155 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 MIR17HGQ75NE6 70 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 VKORC1L1Q8N0U8 176 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 ZCCHC24Q8N2G6 241 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 RPRMLQ8N4K4 120 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 FAM216BQ8N7L0 139 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 DEFB108BQ8NET1 73 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 PRSS33Q8NF86 280 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 C8orf46Q8TAG6 207 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 TMEM37Q8WXS4 190 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 RNASE6Q93091 150 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 RBM14Q96PK6 669 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 CLEC7AQ9BXN2 247 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 ZNF430Q9H8G1 570 aaPredicted RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 DNAJC4Q9NNZ3 241 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 TMEM106BQ9NUM4 274 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 AMMECR1Q9Y4X0 333 aaPredicted RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 YTHDF2Q9Y5A9 579 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 V9GYV3 84 aa2.92□□□□□ -1.94
CAST-242ENST00000515063 YLPM1P49750 1951 aaKnown RBP2.92□□□□□ -1.94
CAST-242ENST00000515063 EPG5Q9HCE0 2579 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 TRBV20OR9-2A0A075B6H5 130 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGKV1OR2-108A0A075B7D4 117 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 TRBV6-1A0A0K0K1D8 114 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 A0A1B0GVY2 172 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 SMIM27A0A1W2PRY6 76 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 KRTAP16-1A8MUX0 517 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 K7EN84 100 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 CRLF1O75462 422 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 MMP23AO75900 390 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGLV1-47P01700 117 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGLV2-23P01705 113 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 HLA-DQA1P01909 254 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGKV1-16P04430 117 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 CRYGBP07316 175 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGHV1-8P0DP01 117 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 RPL35AP18077 110 aaKnown RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 LOXP28300 417 aaPredicted RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 DDTP30046 118 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 MYCNOSP40205 109 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 GNG4P50150 75 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 GNG10P50151 68 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 TPPP2P59282 170 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 RAB4BP61018 213 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 BSPH1Q075Z2 132 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 OR10J3Q5JRS4 329 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 FAM162BQ5T6X4 162 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 SPATA31B1PQ5VZV4 182 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 DUX4L9Q6RFH8 374 aaPredicted RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 ATP5L2Q7Z4Y8 100 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 S100A7AQ86SG5 101 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 TGIF2LXQ8IUE1 241 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 NECAP1Q8NC96 275 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 OR1L6Q8NGR2 347 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 C22orf15Q8WYQ4 148 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 LEAP2Q969E1 77 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 FAM167A-AS1Q96KT0 104 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGF2BP2-AS1Q96M15 143 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 TRGV9Q99603 122 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 VGLL1Q99990 258 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 C2orf88Q9BSF0 95 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 PAXXQ9BUH6 204 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 HINT2Q9BX68 163 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 MRPL20Q9BYC9 149 aaKnown RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 TMEM133Q9H2Q1 129 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 MRPL27Q9P0M9 148 aaKnown RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 RNF24Q9Y225 148 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 KLF12Q9Y4X4 402 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 SOX21Q9Y651 276 aaPredicted RBP2.91□□□□□ -1.94
CAST-242ENST00000515063 CACNA1HO95180 2353 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 MYO15AQ9UKN7 3530 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 PLCE1Q9P212 2302 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 CADP27708 2225 aa2.91□□□□□ -1.94
CAST-242ENST00000515063 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 IGHV1-69-2A0A0G2JMI3 117 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 FAM231BA6NCW3 169 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 IZUMO1RA6ND01 250 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 A8MWP6 167 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 SHISA9B4DS77 424 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 GGTLC3B5MD39 225 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 K7ENP7 123 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 OR7C2O60412 319 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 FOXH1O75593 365 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 IGHV3-7P01780 117 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 HIST1H1EP10412 219 aaKnown RBP2.9□□□□□ -1.95
CAST-242ENST00000515063 DEFA4P12838 97 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 CRISP2P16562 243 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 CCL3L1P16619 93 aa2.9□□□□□ -1.95
CAST-242ENST00000515063 RAB4AP20338 218 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms