RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 MEOX2P50222 304 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 LYZP61626 148 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 SNRPD3P62318 126 aaKnown RBP6.09□□□□□ -1.43
NEDD4-210ENST00000513957 SLC38A11Q08AI6 406 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 RGS21Q2M5E4 152 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 DEFB125Q8N687 156 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 TMEM252Q8N6L7 170 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 PBDC1Q9BVG4 233 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 TMEM147Q9BVK8 224 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 MAP6D1Q9H9H5 199 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 NRN1Q9NPD7 142 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 UQCC1Q9NVA1 299 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
NEDD4-210ENST00000513957 IGHV3OR16-13A0A075B7E8 117 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 IGHV3-74A0A0B4J1X5 117 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 LINC00869P0C866 280 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 GALR1P47211 349 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 H2BFSP57053 126 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 RRAS2P62070 204 aaPredicted RBP6.08□□□□□ -1.44
NEDD4-210ENST00000513957 HAGHQ16775 308 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 TMEM41BQ5BJD5 291 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 STXBP6Q8NFX7 210 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 OR1B1Q8NGR6 318 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 PPP1R1CQ8WVI7 109 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 PPP1R14BQ96C90 147 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 WWC2-AS2Q96NR7 200 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 TP53TG1Q9Y2A0 90 aa6.08□□□□□ -1.44
NEDD4-210ENST00000513957 IGKV3-7A0A075B6H7 116 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 IGHV3-66A0A0C4DH42 116 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 RBMY1BA6NDE4 496 aaKnown RBP6.07□□□□□ -1.44
NEDD4-210ENST00000513957 RBMY1EA6NEQ0 496 aaKnown RBP6.07□□□□□ -1.44
NEDD4-210ENST00000513957 AGPAT2O15120 278 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 HYPMO75409 117 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 CCNKO75909 580 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 RBMY1DP0C7P1 496 aaKnown RBP6.07□□□□□ -1.44
NEDD4-210ENST00000513957 RPL7P18124 248 aaKnown RBP6.07□□□□□ -1.44
NEDD4-210ENST00000513957 PSMB3P49720 205 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 CAMPP49913 170 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 FGL1Q08830 312 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 ARL16Q0P5N6 197 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 OR2F1Q13607 317 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 TMEM88Q6PEY1 159 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 Q6ZRG5 221 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 Q6ZWC4 215 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 OR8I2Q8N0Y5 310 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 RCHY1Q96PM5 261 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 WFDC10AQ9H1F0 79 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 HRH4Q9H3N8 390 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 KCNIP2Q9NS61 270 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 UBQLN2Q9UHD9 624 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 WDR83OSQ9Y284 106 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 ALG5Q9Y673 324 aa6.07□□□□□ -1.44
NEDD4-210ENST00000513957 IGSF23A1L1A6 192 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 FAM24AA6NFZ4 105 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 ZNF98A6NK75 572 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 H3BRN7 92 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 ISLRO14498 428 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 CST7O76096 145 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 MPC2O95563 127 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 LYL1P12980 280 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 ORM2P19652 201 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 GCSHP23434 173 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 ID1P41134 155 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 RPL29P47914 159 aaKnown RBP6.06□□□□□ -1.44
NEDD4-210ENST00000513957 TFPI2P48307 235 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 CAMLGP49069 296 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 EWSR1Q01844 656 aaKnown RBP eCLIP6.06□□□□□ -1.44
NEDD4-210ENST00000513957 OXA1LQ15070 435 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 LRRC37A5PQ49AS3 106 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 SPATA31B1PQ5VZV4 182 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 GBGT1Q8N5D6 347 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 TMEM217Q8N7C4 229 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 OR1L4Q8NGR5 311 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 PFDN5Q99471 154 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 MGST2Q99735 147 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 ASCL2Q99929 193 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 SHANK2-AS3Q9BTD1 123 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
NEDD4-210ENST00000513957 MED28Q9H204 178 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 SELENOKQ9Y6D0 94 aa6.06□□□□□ -1.44
NEDD4-210ENST00000513957 UBE2L5PA0A1B0GUS4 154 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 SIX6O95475 246 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 GIPP09681 153 aaPredicted RBP6.05□□□□□ -1.44
NEDD4-210ENST00000513957 SPP1P10451 314 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 CXCL2P19875 107 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 DEFB131AP59861 70 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 MORN3Q6PF18 240 aaPredicted RBP6.05□□□□□ -1.44
NEDD4-210ENST00000513957 TMEM182Q6ZP80 229 aaPredicted RBP6.05□□□□□ -1.44
NEDD4-210ENST00000513957 STHQ8IWL8 128 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 OR5C1Q8NGR4 320 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 THAP6Q8TBB0 222 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 GATAD1Q8WUU5 269 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 ARL6Q9H0F7 186 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 ARV1Q9H2C2 271 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 OR5AC2Q9NZP5 309 aa6.05□□□□□ -1.44
NEDD4-210ENST00000513957 HUWE1Q7Z6Z7 4374 aaKnown RBP6.05□□□□□ -1.44
NEDD4-210ENST00000513957 A0A087X0K7 114 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
NEDD4-210ENST00000513957 C17orf112F2Z3M2 114 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms