RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 K7EIL1 84 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 TSPAN4O14817 238 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 HMGB3O15347 200 aaKnown RBP8.47□□□□□ -1.05
HTT-213ENST00000513806 PFDN1O60925 122 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 CD81P60033 236 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 FAM78BQ5VT40 261 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 IGFL4Q6B9Z1 124 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 FAM122CQ6P4D5 195 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 C9orf62Q8N4C0 152 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 OR1L4Q8NGR5 311 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 OR2K2Q8NGT1 345 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 GRAMD2BQ96HH9 432 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 ZNF471Q9BX82 626 aaPredicted RBP8.47□□□□□ -1.05
HTT-213ENST00000513806 TMEM231Q9H6L2 316 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 SEPSECSQ9HD40 501 aaKnown RBP8.47□□□□□ -1.05
HTT-213ENST00000513806 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
HTT-213ENST00000513806 MEGF8Q7Z7M0 2845 aa8.46□□□□□ -1.05
HTT-213ENST00000513806 BORCS7-ASMTA0A0B4J1R7 106 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 KANTRA0A1W2PQU2 76 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.06
HTT-213ENST00000513806 MRPS12O15235 138 aaKnown RBP8.46□□□□□ -1.06
HTT-213ENST00000513806 PYYP10082 97 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 DEFB1P60022 68 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 Q8N1Y9 231 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 DEFB125Q8N687 156 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 HYLS1Q96M11 299 aa8.46□□□□□ -1.06
HTT-213ENST00000513806 PRKDCP78527 4128 aaKnown RBP8.46□□□□□ -1.06
HTT-213ENST00000513806 TRAV25A0A0B4J276 109 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 K7EQG2 157 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 TAAR5O14804 337 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 BMI1P35226 326 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 ODF3L2Q3SX64 289 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 PXDC1Q5TGL8 231 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 OR2G3Q8NGZ4 309 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 PFDN5Q99471 154 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
HTT-213ENST00000513806 SLC25A2Q9BXI2 301 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 TIMM9Q9Y5J7 89 aa8.45□□□□□ -1.06
HTT-213ENST00000513806 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
HTT-213ENST00000513806 HELTA6NFD8 242 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 JTBO76095 146 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 OR10G4Q8NGN3 311 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 OR10G9Q8NGN4 311 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 OR10G7Q8NGN6 311 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 GATAD1Q8WUU5 269 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
HTT-213ENST00000513806 KCNIP2Q9NS61 270 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 FUT9Q9Y231 359 aa8.44□□□□□ -1.06
HTT-213ENST00000513806 H3BQ15 152 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 SLC17A3O00476 420 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 SOCS3O14543 225 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 ATF4P18848 351 aaPredicted RBP8.43□□□□□ -1.06
HTT-213ENST00000513806 M6PRP20645 277 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 GALR1P47211 349 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 DEFB131AP59861 70 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
HTT-213ENST00000513806 DEFB121Q5J5C9 76 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 RPP25LQ8N5L8 163 aaKnown RBP8.43□□□□□ -1.06
HTT-213ENST00000513806 RNF182Q8N6D2 247 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 MRAPQ8TCY5 172 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 NRN1Q9NPD7 142 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 RPRMQ9NS64 109 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 FBN3Q75N90 2809 aa8.43□□□□□ -1.06
HTT-213ENST00000513806 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 OR4C46A6NHA9 309 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 OR11H12B2RN74 326 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 OR10J4P0C629 311 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 SPP1P10451 314 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 RPL7P18124 248 aaKnown RBP8.42□□□□□ -1.06
HTT-213ENST00000513806 FHITP49789 147 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 PAFAH1B2P68402 229 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 TMEM41BQ5BJD5 291 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 GTSCR1Q86UQ5 136 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 TMED6Q8WW62 240 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 GNPNAT1Q96EK6 184 aaPredicted RBP8.42□□□□□ -1.06
HTT-213ENST00000513806 LINC00052Q96N35 136 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 ZNF586Q9NXT0 402 aa8.42□□□□□ -1.06
HTT-213ENST00000513806 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 F6UB75 175 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 IGHV4-30-4P0DP06 118 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms