RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MGAT4CQ9UBM8 478 aa7.07□□□□□ -1.28
RNF4-221ENST00000513643 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
RNF4-221ENST00000513643 A0A087X0K7 114 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 TRAV8-2A0A0B4J237 113 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 SMCO3A2RU48 225 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 GOSR2O14653 212 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 PVALBP20472 110 aaPredicted RBP7.06□□□□□ -1.28
RNF4-221ENST00000513643 S100A7P31151 101 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 MEOX2P50222 304 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 CAV2P51636 162 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 ATP6V1FQ16864 119 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 FOXI2Q6ZQN5 318 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 ZNF546Q86UE3 836 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 RSG1Q9BU20 258 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 SAV1Q9H4B6 383 aaPredicted RBP7.06□□□□□ -1.28
RNF4-221ENST00000513643 OR5AC2Q9NZP5 309 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 HIGD1AQ9Y241 93 aa7.06□□□□□ -1.28
RNF4-221ENST00000513643 ELOA3CA0A087WX78 387 aaPredicted RBP7.05□□□□□ -1.28
RNF4-221ENST00000513643 A0A0J9YWU9 116 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 E5RGE8 158 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 PTTG1O95997 202 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
RNF4-221ENST00000513643 ID1P41134 155 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 GALR1P47211 349 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 RPL29P47914 159 aaKnown RBP7.05□□□□□ -1.28
RNF4-221ENST00000513643 BCAP31P51572 246 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 DEFB1P60022 68 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 NHLH2Q02577 135 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
RNF4-221ENST00000513643 SPATA31B1PQ5VZV4 182 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 TMEM217Q8N7C4 229 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 ZNF709Q8N972 641 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 PPP1R1CQ8WVI7 109 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 UHRF2Q96PU4 802 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 RARRES2Q99969 163 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 ARL6Q9H0F7 186 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 ARV1Q9H2C2 271 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 C11orf68Q9H3H3 251 aaKnown RBP7.05□□□□□ -1.28
RNF4-221ENST00000513643 UQCC1Q9NVA1 299 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 X6R8D5 127 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 KMT2AQ03164 3969 aa7.05□□□□□ -1.28
RNF4-221ENST00000513643 A0A0J9YX75 114 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 RPL7P18124 248 aaKnown RBP7.04□□□□□ -1.28
RNF4-221ENST00000513643 CAMLGP49069 296 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 S100A10P60903 97 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 RAP2BP61225 183 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 HBG1P69891 147 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 HBG2P69892 147 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 OPCMLQ14982 345 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 MORN5Q5VZ52 161 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 AMTNQ6UX39 209 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
RNF4-221ENST00000513643 Q8NAQ8 132 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 SLC25A22Q9H936 323 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 DNAJC4Q9NNZ3 241 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 DOK5Q9P104 306 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
RNF4-221ENST00000513643 MPDU1O75352 247 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 MPC2O95563 127 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 RLN2P04090 185 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 OR5G3P0C626 314 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 RBMY1A1P0DJD3 496 aaKnown RBP7.03□□□□□ -1.28
RNF4-221ENST00000513643 RBMY1CP0DJD4 496 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 IGLC2P0DOY2 106 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 CXCL3P19876 107 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 BAXQ07812 192 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 RBMY1FQ15415 496 aaKnown RBP7.03□□□□□ -1.28
RNF4-221ENST00000513643 MIC13Q5XKP0 118 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 LINC00305Q7Z4B0 112 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 S100A7AQ86SG5 101 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 STX12Q86Y82 276 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 NEU1Q99519 415 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 RNF24Q9Y225 148 aa7.03□□□□□ -1.28
RNF4-221ENST00000513643 LCE6AA0A183 80 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
RNF4-221ENST00000513643 F6UB75 175 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
RNF4-221ENST00000513643 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
RNF4-221ENST00000513643 CXCL2P19875 107 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 RAB31Q13636 194 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 OR5C1Q8NGR4 320 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 SAT2Q96F10 170 aaPredicted RBP7.02□□□□□ -1.29
RNF4-221ENST00000513643 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 LINC00052Q96N35 136 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 NPCDR1Q9BY65 106 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 SLC25A31Q9H0C2 315 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 HRH4Q9H3N8 390 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 RPRMQ9NS64 109 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 SLC39A9Q9NUM3 307 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 ALG5Q9Y673 324 aa7.02□□□□□ -1.29
RNF4-221ENST00000513643 DNAH10Q8IVF4 4471 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 H3BQ15 152 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 SSNA1O43805 119 aa7.01□□□□□ -1.29
RNF4-221ENST00000513643 MIFP14174 115 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms