RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 DUSP14O95147 198 aaKnown RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 IGKV3-20P01619 116 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 AMBPP02760 352 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 ZNF705DP0CH99 300 aaPredicted RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 ZNF705BP0CI00 300 aaPredicted RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 RPL7P18124 248 aaKnown RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 B2MP61769 119 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 POLR2GP62487 172 aaKnown RBP eCLIP5.26□□□□□ -1.57
HTT-212ENST00000513639 RAB31Q13636 194 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 IAH1Q2TAA2 248 aaPredicted RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 PXDC1Q5TGL8 231 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 FAM78BQ5VT40 261 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 TEPPQ6URK8 271 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 ZNF705AQ6ZN79 300 aaPredicted RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 CYP2G1PQ6ZSU1 146 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 Q6ZTC4 211 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 RPP25LQ8N5L8 163 aaKnown RBP5.26□□□□□ -1.57
HTT-212ENST00000513639 LRRC20Q8TCA0 184 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 MITD1Q8WV92 249 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 NDUFAF3Q9BU61 184 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 SLC25A22Q9H936 323 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 DOK5Q9P104 306 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 HIGD1AQ9Y241 93 aa5.26□□□□□ -1.57
HTT-212ENST00000513639 IGHV4-4A0A075B6R2 117 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 H3BP45 60 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 GOSR2O14653 212 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 SSSCA1O60232 199 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 TSC22D2O75157 780 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 DEDDO75618 318 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 HBE1P02100 147 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 P0DMU3 169 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 FAM231AP0DMU4 169 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 FAM231CP0DMU5 169 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 ANXA7P20073 488 aaKnown RBP5.25□□□□□ -1.57
HTT-212ENST00000513639 GATA2P23769 480 aaPredicted RBP5.25□□□□□ -1.57
HTT-212ENST00000513639 PLP1P60201 277 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 DLK1P80370 383 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 ZNF846Q147U1 533 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 OXA1LQ15070 435 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 GDF5OSQ5U4N7 250 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 ACOT7LQ6ZUV0 252 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 TMEM208Q9BTX3 173 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 SLC25A39Q9BZJ4 359 aaPredicted RBP5.25□□□□□ -1.57
HTT-212ENST00000513639 SLC25A32Q9H2D1 315 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 PPP1R14DQ9NXH3 145 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 MGAT4CQ9UBM8 478 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 FLVCR2Q9UPI3 526 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 FRAS1Q86XX4 4008 aa5.25□□□□□ -1.57
HTT-212ENST00000513639 K7EPK0 472 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 L7N2F9 121 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 OR5G3P0C626 314 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 METTL15P1P0C7V9 234 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 IL7P13232 177 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 EMP1P54849 157 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 VAMP2P63027 116 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 FGL1Q08830 312 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 RRN3P1Q2M238 152 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 TMEM14EPQ6UXP3 125 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 TMEM182Q6ZP80 229 aaPredicted RBP5.24□□□□□ -1.57
HTT-212ENST00000513639 ZNF709Q8N972 641 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 ZBTB8BQ8NAP8 495 aaPredicted RBP5.24□□□□□ -1.57
HTT-212ENST00000513639 IGF2BP2-AS1Q96M15 143 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 NIPSNAP3BQ9BS92 247 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 SLC35B3Q9H1N7 401 aa5.24□□□□□ -1.57
HTT-212ENST00000513639 C7orf66A4D0T2 115 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 PMS2P5A8MQ11 134 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 A8MTW9 85 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 F6UB75 175 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 LYRM1O43325 122 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 SCGB1D2O95969 90 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 TCRBP04435 133 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 LINC00869P0C866 280 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 PVALBP20472 110 aaPredicted RBP5.23□□□□□ -1.57
HTT-212ENST00000513639 FXYD7P58549 80 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 DEFB1P60022 68 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 RRAS2P62070 204 aaPredicted RBP5.23□□□□□ -1.57
HTT-212ENST00000513639 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 Q6ZRG5 221 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 LINC00299Q6ZSB3 139 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 ZNF546Q86UE3 836 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 POM121L12Q8N7R1 296 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 SDHCQ99643 169 aaPredicted RBP5.23□□□□□ -1.57
HTT-212ENST00000513639 ARL6Q9H0F7 186 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 DNAJC4Q9NNZ3 241 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 DKK2Q9UBU2 259 aa5.23□□□□□ -1.57
HTT-212ENST00000513639 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 C5orf51A6NDU8 294 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 FAM25EA8MYX2 175 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 H3BRN7 92 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 PLA2G10O15496 165 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 MBPP02686 304 aaPredicted RBP5.22□□□□□ -1.57
HTT-212ENST00000513639 CXCL2P19875 107 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
HTT-212ENST00000513639 S100A11P31949 105 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 BTCP35070 178 aa5.22□□□□□ -1.57
HTT-212ENST00000513639 BCAP31P51572 246 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms