RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SLC25A39Q9BZJ4 359 aaPredicted RBP5.72□□□□□ -1.49
HMGXB3-204ENST00000513318 IGHV3-66A0A0C4DH42 116 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 TSPAN4O14817 238 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 C4BPBP20851 252 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 EIF5AP63241 154 aaKnown RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SERF2P84101 59 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 LGALSLQ3ZCW2 172 aaPredicted RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 FFAR4Q5NUL3 377 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 KPRPQ5T749 579 aaPredicted RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 FAM90A2PQ658T7 463 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 PATE2Q6UY27 113 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SIGLEC15Q6ZMC9 328 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 TMUB2Q71RG4 321 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 TCF24Q7RTU0 167 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 LINC00305Q7Z4B0 112 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 OR8I2Q8N0Y5 310 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 OR2G3Q8NGZ4 309 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 TMEM37Q8WXS4 190 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SPAG8Q99932 426 aaPredicted RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SHANK2-AS3Q9BTD1 123 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SCRT1Q9BWW7 348 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF471Q9BX82 626 aaPredicted RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 MRPL32Q9BYC8 188 aaKnown RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 SLC25A22Q9H936 323 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 DNAJC4Q9NNZ3 241 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 CYTL1Q9NRR1 136 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF256Q9Y2P7 627 aaPredicted RBP5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 NOTCH1P46531 2555 aa5.71□□□□□ -1.5
HMGXB3-204ENST00000513318 NBEAL1Q6ZS30 2694 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 IZUMO1RA6ND01 250 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 SPP1P10451 314 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 TPT1P13693 172 aaKnown RBP5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 GP9P14770 177 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 RPL7P18124 248 aaKnown RBP5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 M6PRP20645 277 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 PAFAH1B2P68402 229 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 GUCA2BQ16661 112 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 ACOT6Q3I5F7 207 aaPredicted RBP5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 FAM78BQ5VT40 261 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 C9orf62Q8N4C0 152 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 STOML3Q8TAV4 291 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 SLC25A32Q9H2D1 315 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 SELENOKQ9Y6D0 94 aa5.7□□□□□ -1.5
HMGXB3-204ENST00000513318 IGKV3-7A0A075B6H7 116 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 OR4C46A6NHA9 309 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF785A8K8V0 405 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 MBP02144 154 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 GALR1P47211 349 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 MEOX2P50222 304 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 RHOBP62745 196 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 GCSAMLQ5JQS6 135 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 SAMD13Q5VXD3 122 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 LEMD1Q68G75 181 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 GTSCR1Q86UQ5 136 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 SLC51BQ86UW2 128 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 BPIFA4PQ86YQ2 179 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 BAP18Q8IXM2 172 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 STXBP6Q8NFX7 210 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 SH3BGRL3Q9H299 93 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 MS4A6AQ9H2W1 248 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 NRN1Q9NPD7 142 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 FUT9Q9Y231 359 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
HMGXB3-204ENST00000513318 A0A087X0K7 114 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 A0A1W2PPV4 95 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 H3BS24 57 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 DNASE2O00115 360 aaPredicted RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 SEC11BP0C7V7 166 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 ATF4P18848 351 aaPredicted RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 CDC34P49427 236 aaPredicted RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 TAS2R45P59539 299 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 RAB2AP61019 212 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 KHDC3LQ587J8 217 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 TMEM41BQ5BJD5 291 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 AKR1C8PQ5T2L2 129 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 EIF5AL1Q6IS14 154 aaKnown RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 GBGT1Q8N5D6 347 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 OR10G4Q8NGN3 311 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 OR10G9Q8NGN4 311 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 OR10G7Q8NGN6 311 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 DCANP1Q8TF63 244 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 PRR25Q96S07 402 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 FAM110AQ9BQ89 295 aa5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
HMGXB3-204ENST00000513318 UMAD1C9J7I0 102 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 BOLA2-SMG1P6H3BVE0 249 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 K7EQG2 157 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 OR7C2O60412 319 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 TFPI2P48307 235 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 CD81P60033 236 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 SPATA31B1PQ5VZV4 182 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms