RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-209ENST00000513148 TET2Q6N021 2002 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-209ENST00000513148 UPK2O00526 184 aa12.89□□□□□ -0.35
HMGCL-209ENST00000513148 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
HMGCL-209ENST00000513148 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
HMGCL-209ENST00000513148 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
HMGCL-209ENST00000513148 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
HMGCL-209ENST00000513148 WDR61Q9GZS3 305 aaKnown RBP12.89□□□□□ -0.35
HMGCL-209ENST00000513148 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
HMGCL-209ENST00000513148 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 REG1AP05451 166 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 CFHR3Q02985 330 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-209ENST00000513148 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 VSIRQ9H7M9 311 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 HSPB7Q9UBY9 170 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 E7EUB6 86 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 NUPR1O60356 82 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 NDUFB8O95169 186 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-209ENST00000513148 NSUN5P1Q3KNT7 163 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
HMGCL-209ENST00000513148 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
HMGCL-209ENST00000513148 ZNF580Q9UK33 172 aa12.88□□□□□ -0.35
HMGCL-209ENST00000513148 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
HMGCL-209ENST00000513148 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
HMGCL-209ENST00000513148 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
HMGCL-209ENST00000513148 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-209ENST00000513148 UBE2G2P60604 165 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 FOXA2Q9Y261 457 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-209ENST00000513148 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
HMGCL-209ENST00000513148 RBMXL2O75526 392 aaKnown RBP12.86□□□□□ -0.35
HMGCL-209ENST00000513148 OR5G3P0C626 314 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 CST9LP1Q5W188 147 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 PAM16Q9Y3D7 125 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 PDE6DO43924 150 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 IGHG4P01861 327 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 PF4V1P10720 104 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 ASPHD1Q5U4P2 390 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 RPP25LQ8N5L8 163 aaKnown RBP12.86□□□□□ -0.35
HMGCL-209ENST00000513148 OR5B3Q8NH48 314 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 OR4A16Q8NH70 328 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 ZNF355PQ9NSJ1 428 aa12.86□□□□□ -0.35
HMGCL-209ENST00000513148 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 BATFQ16520 125 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 FAM78BQ5VT40 261 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 ALKBH7Q9BT30 221 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-209ENST00000513148 HINT2Q9BX68 163 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 COX11Q9Y6N1 276 aa12.85□□□□□ -0.35
HMGCL-209ENST00000513148 TRBV9A0A0B4J1U6 114 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 TEX22C9J3V5 150 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 SYNGR2O43760 224 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 PSMB8P28062 276 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 FOXE3Q13461 319 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 STPG4Q8N801 248 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 IGLV1-40P01703 118 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 TFPI2P48307 235 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
HMGCL-209ENST00000513148 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
HMGCL-209ENST00000513148 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-209ENST00000513148 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 FAM90A26D6RGX4 464 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 ELANEP08246 267 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 P0C879 139 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 AREGP15514 252 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 CRISP2P16562 243 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 ADMP35318 185 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 VN1R17PQ8TDU5 208 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 QTRT1Q9BXR0 403 aaKnown RBP12.83□□□□□ -0.36
HMGCL-209ENST00000513148 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 ZNF586Q9NXT0 402 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 PSENENQ9NZ42 101 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 LINC00310P59036 64 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 C18orf65Q6ZTR6 163 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 OR10W1Q8NGF6 305 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 SVIPQ8NHG7 77 aa12.83□□□□□ -0.36
HMGCL-209ENST00000513148 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms