RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PUS1Q9Y606 427 aaKnown RBP eCLIP9.92□□□□□ -0.82
SPCS3-204ENST00000513139 OPRK1P41145 380 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 NPBWR1P48145 328 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 RRAS2P62070 204 aaPredicted RBP9.91□□□□□ -0.82
SPCS3-204ENST00000513139 LRRC37A5PQ49AS3 106 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 RNASEH2CQ8TDP1 164 aaKnown RBP9.91□□□□□ -0.82
SPCS3-204ENST00000513139 RAB40CQ96S21 281 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 NMES1Q9C002 83 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 C11orf1Q9H5F2 150 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 SCRT2Q9NQ03 307 aa9.91□□□□□ -0.82
SPCS3-204ENST00000513139 STRAPQ9Y3F4 350 aaKnown RBP9.91□□□□□ -0.82
SPCS3-204ENST00000513139 APOBP04114 4563 aaKnown RBP9.91□□□□□ -0.82
SPCS3-204ENST00000513139 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 SMIM9A6NGZ8 99 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 H0YIZ8 118 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 L7N2F9 121 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 CORTO00230 105 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 CCNKO75909 580 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 CRYBB3P26998 211 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 ATP5IP56385 69 aaPredicted RBP9.9□□□□□ -0.82
SPCS3-204ENST00000513139 VAMP2P63027 116 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 CYCSP99999 105 aaKnown RBP9.9□□□□□ -0.82
SPCS3-204ENST00000513139 Q6ZNX1 250 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 NOXA1Q86UR1 476 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 PPP1R1CQ8WVI7 109 aa9.9□□□□□ -0.82
SPCS3-204ENST00000513139 FAM24AA6NFZ4 105 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 P2RY1P47900 373 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 EIF2B2P49770 351 aaKnown RBP9.89□□□□□ -0.83
SPCS3-204ENST00000513139 BCAP31P51572 246 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 TAS2R30P59541 319 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 RAB11AP62491 216 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 RPP30P78346 268 aaKnown RBP9.89□□□□□ -0.83
SPCS3-204ENST00000513139 OR8G2PQ6IF36 304 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 PRSS54Q6PEW0 395 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 ZNF705AQ6ZN79 300 aaPredicted RBP9.89□□□□□ -0.83
SPCS3-204ENST00000513139 METTL26Q96S19 204 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 SSBP4Q9BWG4 385 aaPredicted RBP9.89□□□□□ -0.83
SPCS3-204ENST00000513139 OR5AC2Q9NZP5 309 aa9.89□□□□□ -0.83
SPCS3-204ENST00000513139 PMS2P5A8MQ11 134 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
SPCS3-204ENST00000513139 TSC22D2O75157 780 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
SPCS3-204ENST00000513139 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
SPCS3-204ENST00000513139 ARL16Q0P5N6 197 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 Q5BKY6 102 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 TMEM14EPQ6UXP3 125 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 CHAC2Q8WUX2 184 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 ACY3Q96HD9 319 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
SPCS3-204ENST00000513139 XCL2Q9UBD3 114 aa9.88□□□□□ -0.83
SPCS3-204ENST00000513139 RPS10-NUDT3A0A1W2PQS6 291 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 HELTA6NFD8 242 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 MPC2O95563 127 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 RLN2P04090 185 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
SPCS3-204ENST00000513139 GPX4P36969 197 aaPredicted RBP9.87□□□□□ -0.83
SPCS3-204ENST00000513139 CAV2P51636 162 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 RND2P52198 227 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 GAMTQ14353 236 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 OR4X1Q8NH49 305 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 NIPSNAP3BQ9BS92 247 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 SEPSECSQ9HD40 501 aaKnown RBP9.87□□□□□ -0.83
SPCS3-204ENST00000513139 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
SPCS3-204ENST00000513139 IGSF23A1L1A6 192 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 CLN5O75503 358 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 CST7O76096 145 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 SLC25A4P12235 298 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 AP2S1P53680 142 aaPredicted RBP9.86□□□□□ -0.83
SPCS3-204ENST00000513139 TIGITQ495A1 244 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 PSMG4Q5JS54 123 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 ETFRF1Q6IPR1 90 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 LYRM2Q9NU23 88 aaPredicted RBP9.86□□□□□ -0.83
SPCS3-204ENST00000513139 RFNGQ9Y644 331 aa9.86□□□□□ -0.83
SPCS3-204ENST00000513139 hCG_2014768A0A024R1R8 64 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 E5RGE8 158 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 H3BMM0 161 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
SPCS3-204ENST00000513139 EMP1P54849 157 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 SNRPD3P62318 126 aaKnown RBP9.85□□□□□ -0.83
SPCS3-204ENST00000513139 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 C15orf53Q8NAA6 179 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 MBD2Q9UBB5 411 aa9.85□□□□□ -0.83
SPCS3-204ENST00000513139 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 SCGB2A1O75556 95 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 OR10J1P30954 320 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 NHLH2Q02577 135 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 OR10P1Q8NGE3 313 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 SLC35E1Q96K37 410 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 U3KQE9 123 aa9.84□□□□□ -0.83
SPCS3-204ENST00000513139 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms