RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 IGHV3-49A0A0A0MS15 119 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 ETV2O00321 342 aaPredicted RBP8.98□□□□□ -0.97
CPNE4-209ENST00000512055 TMEM42Q69YG0 159 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 TMEM171Q8WVE6 324 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 CT83Q5H943 113 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 SMPXQ9UHP9 88 aa8.98□□□□□ -0.97
CPNE4-209ENST00000512055 A8MWP6 167 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 NPPCP23582 126 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 CCDC144NLQ6NUI1 221 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 FXYD7P58549 80 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 DOCK10Q96BY6 2186 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 A0A0U1RQV1 116 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 IQCF6A8MYZ5 107 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 TFF3Q07654 80 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 MCRIP2Q9BUT9 160 aaKnown RBP8.97□□□□□ -0.97
CPNE4-209ENST00000512055 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 IGHV3-66A0A0C4DH42 116 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 C17orf98A8MV24 154 aa8.97□□□□□ -0.97
CPNE4-209ENST00000512055 SELLP14151 372 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 TEX45Q8NA69 505 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 NTF4P34130 210 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 TCF15Q12870 199 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 MORN5Q5VZ52 161 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 GCSAMQ8N6F7 178 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 C3orf56Q8N813 242 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 MDS2Q8NDY4 140 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 CACNG8Q8WXS5 425 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 FMC1Q96HJ9 113 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 TMEM243Q9BU79 118 aa8.96□□□□□ -0.97
CPNE4-209ENST00000512055 TRBV6-7A0A0A0MS04 114 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 SMAD7O15105 426 aaKnown RBP8.96□□□□□ -0.98
CPNE4-209ENST00000512055 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.98
CPNE4-209ENST00000512055 HERV-K104P63124 156 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 ZCCHC24Q8N2G6 241 aaKnown RBP8.96□□□□□ -0.98
CPNE4-209ENST00000512055 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 A0A1B0GWJ7 208 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 FAM216BQ8N7L0 139 aa8.96□□□□□ -0.98
CPNE4-209ENST00000512055 PPIFP30405 207 aaKnown RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 SNRPD3P62318 126 aaKnown RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 C1orf162Q8NEQ5 155 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 C18orf12Q96KH6 178 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 JPT1Q9UK76 154 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 FOXA2Q9Y261 457 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 FAM106AQ4KMX7 169 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 FAM90A2PQ658T7 463 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 ZNF688P0C7X2 276 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 FOXL2NBQ6ZUU3 175 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 ASCL5Q7RTU5 278 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 DEFB104AQ8WTQ1 72 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 IDI2-AS1Q9NZ38 188 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 INTS1Q8N201 2190 aaKnown RBP8.95□□□□□ -0.98
CPNE4-209ENST00000512055 KIAA1549LQ6ZVL6 1849 aa8.95□□□□□ -0.98
CPNE4-209ENST00000512055 KNCNA6PVL3 124 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 F8W1H4 67 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 LINC01560Q8TB33 94 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 DUX3Q96PT4 197 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 HS3ST6Q96QI5 342 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 TEX38Q6PEX7 206 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 MIR17HGQ75NE6 70 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 TRBV24-1A0A075B6N3 115 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 IFNL4K9M1U5 179 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 CCL20P78556 96 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 ZNF146Q15072 292 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
CPNE4-209ENST00000512055 CDKN1BP46527 198 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-209ENST00000512055 C1orf147Q96MC9 270 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-209ENST00000512055 IGHV1-18A0A0C4DH31 117 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 RAMP3O60896 148 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 RSPO1Q2MKA7 263 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-209ENST00000512055 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 ARPC1AQ92747 370 aa8.94□□□□□ -0.98
CPNE4-209ENST00000512055 PPBPP02775 128 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 HTN3P15516 51 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 ZNF497Q6ZNH5 498 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 C9orf118A6NHY6 69 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 TECTAO75443 2155 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 BSPH1Q075Z2 132 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 UTF1Q5T230 341 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 WFDC9Q8NEX5 89 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 OSTCQ9NRP0 149 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 S4R3C0 116 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 TRGV2A0A075B6R0 118 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 K7EP34 96 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 GATA2P23769 480 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-209ENST00000512055 CFPP27918 469 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 FAM57AQ8TBR7 257 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 Q9H3A6 140 aa8.93□□□□□ -0.98
CPNE4-209ENST00000512055 MED13LQ71F56 2210 aa8.92□□□□□ -0.98
CPNE4-209ENST00000512055 IGHV3OR16-8A0A075B7F1 116 aa8.92□□□□□ -0.98
CPNE4-209ENST00000512055 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
CPNE4-209ENST00000512055 PSPNO60542 156 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms