RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TMEM147Q9BVK8 224 aa10.93□□□□□ -0.66
COL1A1-213ENST00000511732 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-213ENST00000511732 IFNA21P01568 189 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 IL5P05113 134 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 METTL15P1P0C7V9 234 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 SPART-AS1P0CW21 52 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 IL7P13232 177 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 RRAS2P62070 204 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-213ENST00000511732 C4orf46Q504U0 113 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
COL1A1-213ENST00000511732 TMEM189A5PLL7 270 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 SCGB1D2O95969 90 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 PLP1P60201 277 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 FAM222AQ5U5X8 452 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 RNF182Q8N6D2 247 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 GPR82Q96P67 336 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 UHRF2Q96PU4 802 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 C7orf50Q9BRJ6 194 aaKnown RBP10.91□□□□□ -0.66
COL1A1-213ENST00000511732 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
COL1A1-213ENST00000511732 GOLT1BQ9Y3E0 138 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
COL1A1-213ENST00000511732 PLA2G10O15496 165 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 CRXO43186 299 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-213ENST00000511732 PRM2P04554 102 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 LINC00869P0C866 280 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 CNN1P51911 297 aaKnown RBP10.9□□□□□ -0.66
COL1A1-213ENST00000511732 DLK1P80370 383 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 FGL1Q08830 312 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 ARL16Q0P5N6 197 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 IAH1Q2TAA2 248 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-213ENST00000511732 PATE2Q6UY27 113 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-213ENST00000511732 MITD1Q8WV92 249 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.66
COL1A1-213ENST00000511732 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 CENPXA8MT69 81 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 HYPMO75409 117 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 HBE1P02100 147 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 OR5G3P0C626 314 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 RAP2BP61225 183 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 SLC38A11Q08AI6 406 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 SPINK13Q1W4C9 94 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 OR11H7Q8NGC8 314 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 NPVFQ9HCQ7 196 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
COL1A1-213ENST00000511732 YTHDF2Q9Y5A9 579 aaKnown RBP10.89□□□□□ -0.67
COL1A1-213ENST00000511732 FNDC10F2Z333 226 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 M0R2Z0 102 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 CCSO14618 274 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
COL1A1-213ENST00000511732 TSC22D2O75157 780 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 PRB4P10163 310 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-213ENST00000511732 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
COL1A1-213ENST00000511732 RRN3P1Q2M238 152 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 OR10P1Q8NGE3 313 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 ARL6Q9H0F7 186 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 C20orf85Q9H1P6 137 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
COL1A1-213ENST00000511732 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 K7EPK0 472 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-213ENST00000511732 S100A7P31151 101 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 TAS2R30P59541 319 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 SELENOTP62341 195 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 POM121L12Q8N7R1 296 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 ARV1Q9H2C2 271 aa10.87□□□□□ -0.67
COL1A1-213ENST00000511732 A0A087X0K7 114 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
COL1A1-213ENST00000511732 P0DMU3 169 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 CXCL3P19876 107 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 OXA1LQ15070 435 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 ZNF738Q8NE65 137 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 MGAT4CQ9UBM8 478 aa10.86□□□□□ -0.67
COL1A1-213ENST00000511732 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 TRAV6A0A075B6T7 132 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 ZNF705GA8MUZ8 300 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-213ENST00000511732 AGPAT2O15120 278 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 LYRM1O43325 122 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 SNRPCP09234 159 aaKnown RBP10.85□□□□□ -0.67
COL1A1-213ENST00000511732 CNPY1Q3B7I2 92 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 BAP18Q8IXM2 172 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 MGST2Q99735 147 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 C11orf1Q9H5F2 150 aa10.85□□□□□ -0.67
COL1A1-213ENST00000511732 TCRBP04435 133 aa10.84□□□□□ -0.67
COL1A1-213ENST00000511732 HTN3P15516 51 aa10.84□□□□□ -0.67
COL1A1-213ENST00000511732 PSG3Q16557 428 aa10.84□□□□□ -0.67
COL1A1-213ENST00000511732 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
COL1A1-213ENST00000511732 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms