RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 GNG10P50151 68 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 ARPP19P56211 112 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 C1orf134Q5TEV5 83 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 Q8TAT8 98 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 TMEM254Q8TBM7 123 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 TEX37Q96LM6 180 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 GPER1Q99527 375 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 SH3BGRL3Q9H299 93 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 LYRM2Q9NU23 88 aaPredicted RBP0.76□□□□□ -2.29
CHD1-207ENST00000511628 SSR3Q9UNL2 185 aa0.76□□□□□ -2.29
CHD1-207ENST00000511628 CCL25O15444 150 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 GGCTO75223 188 aaKnown RBP0.75□□□□□ -2.29
CHD1-207ENST00000511628 NEFHP12036 1026 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 TMBIM6P55061 237 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 MSMO1Q15800 293 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 MPV17LQ2QL34 196 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 GDF5OSQ5U4N7 250 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 EIF5AL1Q6IS14 154 aaKnown RBP0.75□□□□□ -2.29
CHD1-207ENST00000511628 TMED4Q7Z7H5 227 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 ST6GALNAC3Q8NDV1 305 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 OR13C6PQ8NH95 151 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 LINC00526Q96FQ7 95 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 ZC2HC1AQ96GY0 325 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 CARD19Q96LW7 228 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 PRRT1Q99946 306 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 LINC00467Q9BRT7 94 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 TMEM70Q9BUB7 260 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 OR2J1Q9GZK6 312 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 POPDC3Q9HBV1 291 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 GID8Q9NWU2 228 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 UFC1Q9Y3C8 167 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 ALPK3Q96L96 1907 aa0.75□□□□□ -2.29
CHD1-207ENST00000511628 TRAV10A0A0B4J240 114 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 TRBV6-4A0A1B0GX49 114 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 RIIAD1A6NNX1 92 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 TRGC2P03986 189 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 GLRXP35754 106 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 CRYBA4P53673 196 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
CHD1-207ENST00000511628 LTC4SQ16873 150 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 SCGB2B2Q4G0G5 96 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 ZNF833PQ6ZTB9 187 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 OR5D14Q8NGL3 314 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 C4orf3Q8WVX3 66 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 POP5Q969H6 163 aaKnown RBP0.74□□□□□ -2.29
CHD1-207ENST00000511628 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
CHD1-207ENST00000511628 GGACTQ9BVM4 153 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 LY96Q9Y6Y9 160 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 E9PCH4 1651 aa0.74□□□□□ -2.29
CHD1-207ENST00000511628 MGAMO43451 1857 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 E7EUB6 86 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 KLF7O75840 302 aaPredicted RBP0.73□□□□□ -2.29
CHD1-207ENST00000511628 DNAL4O96015 105 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 OGNP20774 298 aaKnown RBP0.73□□□□□ -2.29
CHD1-207ENST00000511628 DSCR4P56555 118 aaPredicted RBP0.73□□□□□ -2.29
CHD1-207ENST00000511628 MYL5Q02045 173 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 POU6F1Q14863 301 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 C4orf22Q6V702 233 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 NEK7Q8TDX7 302 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 BORCS5Q969J3 196 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 RAB37Q96AX2 223 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 LINC00052Q96N35 136 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 PBDC1Q9BVG4 233 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 PBOV1Q9GZY1 135 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 RNF11Q9Y3C5 154 aa0.73□□□□□ -2.29
CHD1-207ENST00000511628 UHRF1BP1Q6BDS2 1440 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 EML5Q05BV3 1969 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 IGHV1-58A0A0C4DH39 117 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 DEFB115Q30KQ5 88 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 FAM74A1Q5RGS3 127 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 TMEM14EPQ6UXP3 125 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 OR5D16Q8NGK9 328 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 OR4K15Q8NH41 348 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 PPTC7Q8NI37 304 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 CHCHD1Q96BP2 118 aaKnown RBP0.72□□□□□ -2.29
CHD1-207ENST00000511628 ZNF714Q96N38 554 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 CD109Q6YHK3 1445 aa0.72□□□□□ -2.29
CHD1-207ENST00000511628 A0A087WSZ3 146 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 E5RI56 91 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 M0R233 179 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 PFDN1O60925 122 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 ERC2-IT1O76042 136 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 APOA2P02652 100 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 S100A5P33763 92 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 CDK6Q00534 326 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 FKBP1CQ5VVH2 108 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 PLEKHB2Q96CS7 222 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 MALSU1Q96EH3 234 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 CACYBPQ9HB71 228 aaKnown RBP0.71□□□□□ -2.3
CHD1-207ENST00000511628 ORMDL1Q9P0S3 153 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 LAMTOR3Q9UHA4 124 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 OR52A1Q9UKL2 312 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 COL1A1P02452 1464 aaPredicted RBP0.71□□□□□ -2.3
CHD1-207ENST00000511628 PTPRFP10586 1907 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 TNS3Q68CZ2 1445 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 SIP14410 1827 aa0.71□□□□□ -2.3
CHD1-207ENST00000511628 CHD3Q12873 2000 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms