RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SCGB2A1O75556 95 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 HNRNPCP07910 306 aaKnown RBP eCLIP4.07□□□□□ -1.76
PROM1-211ENST00000511153 ATP6V0CP27449 155 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 ATP5IP56385 69 aaPredicted RBP4.07□□□□□ -1.76
PROM1-211ENST00000511153 ATP6V1FQ16864 119 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 VWC2Q2TAL6 325 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 DEFB114Q30KQ6 69 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 LGALSLQ3ZCW2 172 aaPredicted RBP4.07□□□□□ -1.76
PROM1-211ENST00000511153 C9orf66Q5T8R8 295 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 FAM122CQ6P4D5 195 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 TCTE3Q8IZS6 198 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 FAM24BQ8N5W8 94 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 ZNF709Q8N972 641 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 ZNF471Q9BX82 626 aaPredicted RBP4.07□□□□□ -1.76
PROM1-211ENST00000511153 SLC25A32Q9H2D1 315 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 SLC39A9Q9NUM3 307 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 SMPXQ9UHP9 88 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 HIGD1AQ9Y241 93 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
PROM1-211ENST00000511153 AGRNO00468 2067 aa4.07□□□□□ -1.76
PROM1-211ENST00000511153 BORCS7-ASMTA0A0B4J1R7 106 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 KANTRA0A1W2PQU2 76 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 NPIPB6E9PJ23 425 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 LGALS9O00182 355 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 C1QBP02746 253 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 CD7P09564 240 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 PYYP10082 97 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 HLA-DMBP28068 263 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 RAB31Q13636 194 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 OPCMLQ14982 345 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 C10orf113Q5VZT2 155 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 LAMTOR1Q6IAA8 161 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 RBPMS2Q6ZRY4 209 aaKnown RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 LINC00305Q7Z4B0 112 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 IQCF2Q8IXL9 164 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 OR8I2Q8N0Y5 310 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 C9orf62Q8N4C0 152 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 KCNRGQ8N5I3 272 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 TMEM37Q8WXS4 190 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 C17orf77Q96MU5 243 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 GINS3Q9BRX5 216 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 GGACTQ9BVM4 153 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ARV1Q9H2C2 271 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ZNF98A6NK75 572 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ZNF785A8K8V0 405 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 A8MWP6 167 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 DNASE2O00115 360 aaPredicted RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 BCL2L11O43521 198 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 TNFRSF6BO95407 300 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 FABP1P07148 127 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 OR10J4P0C629 311 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ZNF688P0C7X2 276 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ZNF705DP0CH99 300 aaPredicted RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 ZNF705BP0CI00 300 aaPredicted RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 GP9P14770 177 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 CRYBB3P26998 211 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 FHITP49789 147 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 FGF8P55075 233 aaPredicted RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 CD81P60033 236 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 DEFA6Q01524 100 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 FAM74A1Q5RGS3 127 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 FAM78BQ5VT40 261 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 Q6ZRG5 221 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 SSX7Q7RTT5 188 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 APRG1Q8IVJ8 170 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 RNF182Q8N6D2 247 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ARL6IP6Q8N6S5 226 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 WFDC9Q8NEX5 89 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 OR2G3Q8NGZ4 309 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 MRAPQ8TCY5 172 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 BLNKQ8WV28 456 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 PCNPQ8WW12 178 aaKnown RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 TMED6Q8WW62 240 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 ASB13Q8WXK3 278 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 NARS2Q96I59 477 aaKnown RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 LINC00052Q96N35 136 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 SLC25A39Q9BZJ4 359 aaPredicted RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 DNAJC4Q9NNZ3 241 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 MRPL27Q9P0M9 148 aaKnown RBP4.06□□□□□ -1.76
PROM1-211ENST00000511153 SMAD5-AS1Q9Y6J3 95 aa4.06□□□□□ -1.76
PROM1-211ENST00000511153 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 KNCNA6PVL3 124 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 C17orf112F2Z3M2 114 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 H3BRN7 92 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 K7EMT4 169 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 PAX4O43316 350 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 IGLV1-51P01701 117 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 MED14OSP0DP75 135 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 RPL29P47914 159 aaKnown RBP4.05□□□□□ -1.76
PROM1-211ENST00000511153 ZNF266Q14584 549 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 BEAN1Q3B7T3 259 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 SIGLEC15Q6ZMC9 328 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 DEFB125Q8N687 156 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 OR10G4Q8NGN3 311 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 OR10G9Q8NGN4 311 aa4.05□□□□□ -1.76
PROM1-211ENST00000511153 OR10G7Q8NGN6 311 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms