RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CMSS1Q9BQ75 279 aaKnown RBP3.78□□□□□ -1.8
USP53-206ENST00000510737 TMEM208Q9BTX3 173 aa3.78□□□□□ -1.8
USP53-206ENST00000510737 TMEM59Q9BXS4 323 aa3.78□□□□□ -1.8
USP53-206ENST00000510737 IGKV1D-8A0A087WSZ0 117 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 IGKV1D-13A0A0B4J2D9 117 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 TMEM14DPA8MWL7 114 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 F6UB75 175 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 CRXO43186 299 aaPredicted RBP3.77□□□□□ -1.81
USP53-206ENST00000510737 DENRO43583 198 aaKnown RBP3.77□□□□□ -1.81
USP53-206ENST00000510737 HLA-DQB1P01920 261 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 IGKV1-13P0DP09 117 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 AP2S1P53680 142 aaPredicted RBP3.77□□□□□ -1.81
USP53-206ENST00000510737 WFDC2Q14508 124 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 Q499Y3 187 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 CCDC58Q4VC31 144 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 FAM78BQ5VT40 261 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 LYPD5Q6UWN5 251 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 HSD17B13Q7Z5P4 300 aaPredicted RBP3.77□□□□□ -1.81
USP53-206ENST00000510737 CEND1Q8N111 149 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 TCTEX1D2Q8WW35 142 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 MAFIPQ8WZ33 124 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 MRPL48Q96GC5 212 aaKnown RBP3.77□□□□□ -1.81
USP53-206ENST00000510737 IGF2BP2-AS1Q96M15 143 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 PECRQ9BY49 303 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 DCSTAMPQ9H295 470 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 CKLFQ9UBR5 152 aa3.77□□□□□ -1.81
USP53-206ENST00000510737 ZFP92A6NM28 416 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 MFNGO00587 321 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 ZNF861PO60384 105 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 DIRAS3O95661 229 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 LALBAP00709 142 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 CDK1P06493 297 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 UBBP0CG47 229 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 LIMS3P0CW19 117 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 LIMS4P0CW20 117 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 MRPS15P82914 257 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 SSX1Q16384 188 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 POU2AF1Q16633 256 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 THOC7Q6I9Y2 204 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 MZT2BQ6NZ67 158 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 AMTNQ6UX39 209 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 FOXI2Q6ZQN5 318 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 OR1L8Q8NGR8 309 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 OR13F1Q8NGS4 319 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 OR1P1Q8NH06 330 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 TRUB1Q8WWH5 349 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 LSM10Q969L4 123 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 PINX1Q96BK5 328 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 LINC00052Q96N35 136 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 METTL26Q96S19 204 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 HSD17B10Q99714 261 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 SLC29A1Q99808 456 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 CIB1Q99828 191 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 GINS4Q9BRT9 223 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 HINT2Q9BX68 163 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 NRN1Q9NPD7 142 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 NOP10Q9NPE3 64 aaKnown RBP3.76□□□□□ -1.81
USP53-206ENST00000510737 TAS2R8Q9NYW2 309 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 RNF24Q9Y225 148 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 LY96Q9Y6Y9 160 aa3.76□□□□□ -1.81
USP53-206ENST00000510737 PSCAO43653 123 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 FKBP6O75344 327 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 FCGR3AP08637 254 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 CD36P16671 472 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 NFYAP23511 347 aaPredicted RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 EIF2B2P49770 351 aaKnown RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 RORCP51449 518 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 TAS2R31P59538 309 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 ACOT6Q3I5F7 207 aaPredicted RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 C1orf100Q5SVJ3 147 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 OR52I1Q8NGK6 324 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 SMIM19Q96E16 107 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 PGLYRP3Q96LB9 341 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 DERL3Q96Q80 235 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 MYCBPQ99417 103 aaPredicted RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 AMBNQ9NP70 447 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 BABAM2Q9NXR7 383 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 MRPL36Q9P0J6 103 aaKnown RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 CLEC2DQ9UHP7 191 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 ARL2BPQ9Y2Y0 163 aa3.75□□□□□ -1.81
USP53-206ENST00000510737 TIMM8BQ9Y5J9 83 aaPredicted RBP3.75□□□□□ -1.81
USP53-206ENST00000510737 A0A0J9YX75 114 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 A8MTW9 85 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 G3V2T6 193 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 HPRT1P00492 218 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 NQO2P16083 231 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 ID1P41134 155 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 NPBWR1P48145 328 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 ETV1P50549 477 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 HSP90B2PQ58FF3 399 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 MEDAGQ5VYS4 303 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 TTC23Q5W5X9 447 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 WFDC10BQ8IUB3 73 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 CMTM1Q8IZ96 169 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 NKAIN3Q8N8D7 197 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 SAMD12Q8N8I0 201 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 ZFP41Q8N8Y5 198 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 OR10J6PQ8NGY7 276 aa3.74□□□□□ -1.81
USP53-206ENST00000510737 TMEM230Q96A57 120 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms