RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 IGLV3-19P01714 112 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 IGLV3-12A0A075B6K2 115 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 IGKV3D-15A0A087WSY6 115 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 D6R8Y8 96 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 SAA2P0DJI9 122 aaPredicted RBP6.94□□□□□ -1.3
HTT-208ENST00000510626 ST6GALNAC3Q8NDV1 305 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 SPATA25Q9BR10 227 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 FOXL2P58012 376 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 AGFG2O95081 481 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 TMEM75Q8N9X5 138 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 RPUSD1Q9UJJ7 312 aaKnown RBP6.94□□□□□ -1.3
HTT-208ENST00000510626 TCRAP04437 139 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 NRTNQ99748 197 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 EDA2RQ9HAV5 297 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 ZFYVE26Q68DK2 2539 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 ANAPC10Q9UM13 185 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 PCOLCEQ15113 449 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 A0A087X0K7 114 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 RPL32P62910 135 aaKnown RBP6.93□□□□□ -1.3
HTT-208ENST00000510626 IGFBPL1Q8WX77 278 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MUC21Q5SSG8 566 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 ZNF826PQ6ZT77 177 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MGAMO43451 1857 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 TRBV7-1A0A0A6YYK4 115 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 RPP25LQ8N5L8 163 aaKnown RBP6.93□□□□□ -1.3
HTT-208ENST00000510626 IGHV3-21A0A0B4J1V1 117 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 C9orf172C9J069 976 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 TFPI2P48307 235 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 Q6ZS52 159 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 GFI1Q99684 422 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 PAQR4Q8N4S7 273 aaPredicted RBP6.93□□□□□ -1.3
HTT-208ENST00000510626 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 PRR32B1ATL7 298 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 SNAI2O43623 268 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 RASL10AQ92737 203 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 IGKV1-9A0A0C4DH69 117 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MPV17L2Q567V2 206 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 Q6ZS92 163 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 WBP1Q96G27 269 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 ZNHIT1O43257 154 aa6.93□□□□□ -1.3
HTT-208ENST00000510626 MRPL20Q9BYC9 149 aaKnown RBP6.93□□□□□ -1.3
HTT-208ENST00000510626 LY6G5BQ8NDX9 201 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 LOC101059948A0A1B0GTJ6 334 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 VWC2LB2RUY7 222 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 EGR1P18146 543 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 IL15RAQ13261 267 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 SOCS3O14543 225 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 Q71RC1 249 aaPredicted RBP6.92□□□□□ -1.3
HTT-208ENST00000510626 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 TRGV3P03979 118 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 SLC22A18ASQ8N1D0 253 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 OR13A1Q8NGR1 328 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 TMEM155Q4W5P6 130 aa6.92□□□□□ -1.3
HTT-208ENST00000510626 CRYGSP22914 178 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 KLF5Q13887 457 aaPredicted RBP6.91□□□□□ -1.3
HTT-208ENST00000510626 ATOX1O00244 68 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 SVIPQ8NHG7 77 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 CD7P09564 240 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 QRFPP83859 136 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 DUX3Q96PT4 197 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 IGHV3-72A0A0B4J1Y9 119 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 IGKV1D-13A0A0B4J2D9 117 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 IGKV1-13P0DP09 117 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 FAM223BA6NKX1 122 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 C4orf51C9J302 202 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 FAM223AQ8IWN6 122 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 CCL21O00585 134 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 BVES-AS1Q5T3Y7 98 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 E9PQ18 207 aa6.91□□□□□ -1.3
HTT-208ENST00000510626 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
HTT-208ENST00000510626 PCDH15Q96QU1 1955 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 ADCYAP1P18509 176 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 MINOS1Q5TGZ0 78 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 C11orf52Q96A22 123 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 MINOS1-NBL1R4GNA1 71 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 MBNL3Q9NUK0 354 aaKnown RBP6.9□□□□□ -1.3
HTT-208ENST00000510626 PFN1P07737 140 aaKnown RBP6.9□□□□□ -1.3
HTT-208ENST00000510626 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
HTT-208ENST00000510626 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 PRSS47A8MTI9 375 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 CCL4P13236 92 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 CEND1Q8N111 149 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 HAX1O00165 279 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 MST1P26927 711 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms