RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 CYP2G1PQ6ZSU1 146 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 TMEM144Q7Z5S9 345 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 GTSCR1Q86UQ5 136 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 TMEM252Q8N6L7 170 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 C20orf173Q96LM9 149 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 METTL26Q96S19 204 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 RAB40CQ96S21 281 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 GINS3Q9BRX5 216 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 RNF126Q9BV68 326 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 PBDC1Q9BVG4 233 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 LYRM2Q9NU23 88 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 DOK5Q9P104 306 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 ZMAT5Q9UDW3 170 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 CACFD1Q9UGQ2 172 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 U3KQK5 164 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
TOPBP1-207ENST00000509162 TRAV8-2A0A0B4J237 113 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 C5orf51A6NDU8 294 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 PRAF2O60831 178 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 ZNF688P0C7X2 276 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 LINC00869P0C866 280 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 EIF2B2P49770 351 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 ATP5IP56385 69 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 DEFB131AP59861 70 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RAP2BP61225 183 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RAB11AP62491 216 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 AKR1C1Q04828 323 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 FCN2Q15485 313 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 LRRC37A5PQ49AS3 106 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 Q5BKY6 102 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 GDF5OSQ5U4N7 250 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 ETFRF1Q6IPR1 90 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RBPMS2Q6ZRY4 209 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 STXBP6Q8NFX7 210 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 UHRF2Q96PU4 802 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 GGTLC1Q9BX51 225 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 MGAT4CQ9UBM8 478 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RABAC1Q9UI14 185 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 WDR83OSQ9Y284 106 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 RFNGQ9Y644 331 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 DNAH11Q96DT5 4516 aa5.28□□□□□ -1.56
TOPBP1-207ENST00000509162 TRAV2A0A0B4J234 112 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 PIGBOS1A0A0B4J2F0 54 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 UBE2L5PA0A1B0GUS4 154 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 SMCO3A2RU48 225 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 OR4C46A6NHA9 309 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 FNDC10F2Z333 226 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 NPPCP23582 126 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 HLA-DMBP28068 263 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 CAV2P51636 162 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 PLP1P60201 277 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 DCTN2Q13561 401 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 OPCMLQ14982 345 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 OXA1LQ15070 435 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 GCSAMLQ5JQS6 135 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 SPATA31B1PQ5VZV4 182 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 IGFL4Q6B9Z1 124 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 NOXA1Q86UR1 476 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 TMEM217Q8N7C4 229 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 BPIFCQ8NFQ6 507 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 Q8WTZ3 238 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 PPP1R1CQ8WVI7 109 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 TMEM37Q8WXS4 190 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 OVOL2Q9BRP0 275 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 NMES1Q9C002 83 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 WFDC1Q9HC57 220 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 MBD2Q9UBB5 411 aa5.27□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF98A6NK75 572 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 F6UB75 175 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 AGPAT2O15120 278 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 MPC2O95563 127 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 LYL1P12980 280 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 SULT1A1P50225 295 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 DEFA1P59665 94 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 DEFA3P59666 94 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 NHLH2Q02577 135 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 DEFB135Q30KP9 77 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 SIGLEC15Q6ZMC9 328 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 SHANK2-AS3Q9BTD1 123 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 GPN1Q9HCN4 374 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 TENM2Q9NT68 2774 aa5.26□□□□□ -1.57
TOPBP1-207ENST00000509162 LOC102724200A0A096LPH7 203 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 TRAV5A0A0B4J249 113 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 SLC17A3O00476 420 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 EIF3GO75821 320 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 SNRPCP09234 159 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 ORM2P19652 201 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 HOXA5P20719 270 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 BCAP31P51572 246 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 PSMG4Q5JS54 123 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 LAMTOR1Q6IAA8 161 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 OR10P1Q8NGE3 313 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms