RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 DEFB136Q30KP8 78 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 C9orf66Q5T8R8 295 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 ACOT7LQ6ZUV0 252 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 AKAP14Q86UN6 197 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 BPIFCQ8NFQ6 507 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR51G1Q8NGK1 321 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR9G4Q8NGQ1 327 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR5C1Q8NGR4 320 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM190Q8WZ59 177 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 DLX4Q92988 240 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 ACY3Q96HD9 319 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 NARS2Q96I59 477 aaKnown RBP4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 CHRDL1Q9BU40 450 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZC4H2Q9NQZ6 224 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 KCNIP2Q9NS61 270 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 UQCC1Q9NVA1 299 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 TNFSF18Q9UNG2 199 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 WDR83OSQ9Y284 106 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 HSPB11Q9Y547 144 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 DNHD1Q96M86 4753 aa4.17□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGKV1D-37A0A075B6S9 117 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 FXYD6-FXYD2A0A087WZ82 144 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 A0A0D9SG52 128 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 A0A1W2PS18 150 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 C17orf112F2Z3M2 114 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 IFNA5P01569 189 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 TRBV12-3P01733 135 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGHV3-48P01763 117 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 C1QBP02746 253 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 C8orf88P0DMB2 117 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 SYNJ2BPP57105 145 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 PLP1P60201 277 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 DEFA5Q01523 94 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 ARL16Q0P5N6 197 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF345Q14585 488 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 TIGITQ495A1 244 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 TOMM20LQ6UXN7 152 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 HAPLN4Q86UW8 402 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 PPP1R14BQ96C90 147 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 ST6GAL2Q96JF0 529 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 HYLS1Q96M11 299 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 METTL26Q96S19 204 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 ATP5SQ99766 215 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM231Q9H6L2 316 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 DAZ1Q9NQZ3 744 aaKnown RBP4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 TECRQ9NZ01 308 aaKnown RBP4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 MRPL36Q9P0J6 103 aaKnown RBP4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 PUS1Q9Y606 427 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 S4R3C0 116 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 NBEAL1Q6ZS30 2694 aa4.16□□□□□ -1.74
HMGB1P44-201ENST00000508597 NOTCH1P46531 2555 aa4.15□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGKV1OR2-108A0A075B7D4 117 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 BORCS7-ASMTA0A0B4J1R7 106 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 TRAV25A0A0B4J276 109 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 WI2-2373I1.2A0A1W2PRP0 233 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF320A2RRD8 509 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 C2orf70A6NJV1 201 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 G3V3Q6 166 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 AGPAT2O15120 278 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 YIF1AO95070 293 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 C4BPBP20851 252 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 NPPCP23582 126 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 CRYBB3P26998 211 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 RPL29P47914 159 aaKnown RBP4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 CAMLGP49069 296 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 EIF2B2P49770 351 aaKnown RBP4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 EIF5AP63241 154 aaKnown RBP4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 Q5BKY6 102 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 C1orf194Q5T5A4 169 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 BTNL8Q6UX41 500 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 PQLC2Q6ZP29 291 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 Q6ZRG5 221 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 CYP2G1PQ6ZSU1 146 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF709Q8N972 641 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 SCGB1C1Q8TD33 95 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 GNPNAT1Q96EK6 184 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 GRAMD2BQ96HH9 432 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 URB1-AS1Q96HZ7 61 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 DUX3Q96PT4 197 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 PFDN5Q99471 154 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 NEURL2Q9BR09 285 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 WDR61Q9GZS3 305 aaKnown RBP4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 MFFQ9GZY8 342 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 RABAC1Q9UI14 185 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 TIMM9Q9Y5J7 89 aa4.15□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGHV7-4-1A0A0J9YVY3 117 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 UBE2L5PA0A1B0GUS4 154 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 KANTRA0A1W2PQU2 76 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM213A2RRL7 107 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 RNF222A6NCQ9 220 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 SEC14L6B5MCN3 397 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 ARPC5O15511 151 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 HYPMO75409 117 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 SAP30O75446 220 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 IL4P05112 153 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 CSN3P07498 182 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 FOLR2P14207 255 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms