RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZNF701M0R085 212 aaPredicted RBP9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 BAK1Q16611 211 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 OR1B1Q8NGR6 318 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 FLVCR2Q9UPI3 526 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
HMGCS1-205ENST00000508319 TRAV8-2A0A0B4J237 113 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 TEX48A0A1B0GUV7 120 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 NAP1L6A6NFF2 107 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 H3BRN7 92 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 CCNKO75909 580 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 OR4E1P0C645 316 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 P0DMU3 169 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 BTCP35070 178 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 TRIQKQ629K1 86 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 CYP2G1PQ6ZSU1 146 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 GPR82Q96P67 336 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 SDHCQ99643 169 aaPredicted RBP9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 NIPSNAP3BQ9BS92 247 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 PKD1P98161 4303 aa9.26□□□□□ -0.93
HMGCS1-205ENST00000508319 LOC102723971A0A1B0GUV8 181 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 SMCO3A2RU48 225 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 A6NJY4 79 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 SSSCA1O60232 199 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 HBE1P02100 147 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 CNN1P51911 297 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 C7orf50Q9BRJ6 194 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 SHANK2-AS3Q9BTD1 123 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 PSENENQ9NZ42 101 aa9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-205ENST00000508319 CRXO43186 299 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 IL5P05113 134 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 ANXA7P20073 488 aaKnown RBP9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 S100A7P31151 101 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 INPP1P49441 399 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 PLP1P60201 277 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 OXA1LQ15070 435 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 RRN3P1Q2M238 152 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 TMEM14EPQ6UXP3 125 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 OR11H7Q8NGC8 314 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 UHRF2Q96PU4 802 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 HIGD1AQ9Y241 93 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
HMGCS1-205ENST00000508319 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 M0R2Z0 102 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 IFNA21P01568 189 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 METTL15P1P0C7V9 234 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 LINC00869P0C866 280 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 RPL7P18124 248 aaKnown RBP9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 RAP2BP61225 183 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 RRAS2P62070 204 aaPredicted RBP9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 DLK1P80370 383 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 RCL1Q9Y2P8 373 aaKnown RBP9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
HMGCS1-205ENST00000508319 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 FNDC10F2Z333 226 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 K7EPK0 472 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 RTL8CO15255 209 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 HYPMO75409 117 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 DUSP14O95147 198 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 SELENOTP62341 195 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 FGL1Q08830 312 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 IAH1Q2TAA2 248 aaPredicted RBP9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 C4orf46Q504U0 113 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 BAP18Q8IXM2 172 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
HMGCS1-205ENST00000508319 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.93
HMGCS1-205ENST00000508319 A0A087X0K7 114 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 MRPS12O15235 138 aaKnown RBP9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 TSC22D2O75157 780 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 SCGB1D2O95969 90 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 INSP01308 110 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 PRM2P04554 102 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 OR5G3P0C626 314 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 IL7P13232 177 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 HTN3P15516 51 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 CXCL3P19876 107 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 PATE2Q6UY27 113 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 ZBTB8BQ8NAP8 495 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 ZNF738Q8NE65 137 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 MITD1Q8WV92 249 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.94
HMGCS1-205ENST00000508319 CENPXA8MT69 81 aa9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 ZNF705GA8MUZ8 300 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-205ENST00000508319 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms