RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 TSKUQ8WUA8 353 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 SLC25A39Q9BZJ4 359 aaPredicted RBP11.44□□□□□ -0.58
DDX41-208ENST00000507955 ZNF586Q9NXT0 402 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 MYO18BQ8IUG5 2567 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
DDX41-208ENST00000507955 HLA-DQA1P01909 254 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 APCSP02743 223 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 FAM120AOSQ5T036 256 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
DDX41-208ENST00000507955 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
DDX41-208ENST00000507955 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 C3orf79P0CE67 100 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
DDX41-208ENST00000507955 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 ITLN2Q8WWU7 325 aaPredicted RBP11.43□□□□□ -0.58
DDX41-208ENST00000507955 Q9H3A6 140 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 SH2D7A6NKC9 451 aaPredicted RBP11.43□□□□□ -0.58
DDX41-208ENST00000507955 UBE2G1P62253 170 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 C5orf64Q2M2E5 130 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 CYB5R2Q6BCY4 276 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 BPESC1Q9GZL8 116 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 C7orf69Q9H7B7 122 aa11.43□□□□□ -0.58
DDX41-208ENST00000507955 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 M0R1W7 72 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 CEACAM3P40198 252 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 BATFQ16520 125 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 PRORYQ9H606 182 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 RPLP1P05386 114 aaKnown RBP11.42□□□□□ -0.58
DDX41-208ENST00000507955 TMEM68Q96MH6 324 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 TMEM208Q9BTX3 173 aa11.42□□□□□ -0.58
DDX41-208ENST00000507955 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
DDX41-208ENST00000507955 IL4P05112 153 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 NTF3P20783 257 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 ZNF331Q9NQX6 463 aaPredicted RBP11.41□□□□□ -0.58
DDX41-208ENST00000507955 NDUFA3O95167 84 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 MAJINQ3KP22 176 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 COX19Q49B96 90 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 NPBQ8NG41 125 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 RNF5Q99942 180 aa11.41□□□□□ -0.58
DDX41-208ENST00000507955 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 M0QZK8 103 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 TFPI2P48307 235 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
DDX41-208ENST00000507955 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 NPSP0C0P6 89 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 TCF24Q7RTU0 167 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
DDX41-208ENST00000507955 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
DDX41-208ENST00000507955 TCRAP04437 139 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 FCGR2BP31994 310 aaPredicted RBP11.39□□□□□ -0.59
DDX41-208ENST00000507955 CAMPP49913 170 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 PLP1P60201 277 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
DDX41-208ENST00000507955 CIARTQ8N365 385 aaPredicted RBP11.39□□□□□ -0.59
DDX41-208ENST00000507955 ZNF491Q8N8L2 437 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 MRPL27Q9P0M9 148 aaKnown RBP11.39□□□□□ -0.59
DDX41-208ENST00000507955 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 OR2J3O76001 311 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 ARPC1AQ92747 370 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 GRAMD2BQ96HH9 432 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 SIRPDQ9H106 197 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 TMEM11P17152 192 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 PAX2Q02962 417 aa11.39□□□□□ -0.59
DDX41-208ENST00000507955 OR2T8A6NH00 312 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 LINC01548A6NM66 108 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 F8W735 103 aaPredicted RBP11.38□□□□□ -0.59
DDX41-208ENST00000507955 DLEU1O43261 78 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 GNG7O60262 68 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 NDUFB8O95169 186 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 POLQO75417 2590 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 M0R3E3 92 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 ZNF562Q6V9R5 426 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 PRNTQ86SH4 94 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 C5orf17Q8NAS9 161 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 GPR82Q96P67 336 aa11.38□□□□□ -0.59
DDX41-208ENST00000507955 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
DDX41-208ENST00000507955 EFNA4P52798 201 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 Q56UQ5 140 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 ALKBH7Q9BT30 221 aaPredicted RBP11.37□□□□□ -0.59
DDX41-208ENST00000507955 MLST8Q9BVC4 326 aa11.37□□□□□ -0.59
DDX41-208ENST00000507955 KLF12Q9Y4X4 402 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 2072.6 ms