RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 UHRF2Q96PU4 802 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 C7orf50Q9BRJ6 194 aaKnown RBP11.5□□□□□ -0.57
HOXC4-203ENST00000507650 SHANK2-AS3Q9BTD1 123 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
HOXC4-203ENST00000507650 C20orf85Q9H1P6 137 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
HOXC4-203ENST00000507650 IGHV3OR16-12A0A075B7B8 117 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 SMCO3A2RU48 225 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 SCGB1D2O95969 90 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 CFDP00746 253 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-203ENST00000507650 MBPP02686 304 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-203ENST00000507650 TCTAP57738 103 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 PLP1P60201 277 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 C16orf92Q96LL3 132 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
HOXC4-203ENST00000507650 DEFB131BA0A096LNP1 70 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
HOXC4-203ENST00000507650 CRXO43186 299 aaPredicted RBP11.48□□□□□ -0.57
HOXC4-203ENST00000507650 LYRM1O43325 122 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 IFNA21P01568 189 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 AMBPP02760 352 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 PRM2P04554 102 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 LINC00869P0C866 280 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 GALR1P47211 349 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 DLK1P80370 383 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 PSG9Q00887 426 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 TMEM147Q9BVK8 224 aa11.48□□□□□ -0.57
HOXC4-203ENST00000507650 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 K7EPK0 472 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 TSC22D2O75157 780 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 IL5P05113 134 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 MEOX2P50222 304 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 EMP1P54849 157 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 SEC22CQ9BRL7 303 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 KIAA1109Q2LD37 5005 aa11.47□□□□□ -0.57
HOXC4-203ENST00000507650 TCRBP04435 133 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 CNN1P51911 297 aaKnown RBP11.46□□□□□ -0.57
HOXC4-203ENST00000507650 MORN5Q5VZ52 161 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 OR11H7Q8NGC8 314 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 HIGD1AQ9Y241 93 aa11.46□□□□□ -0.57
HOXC4-203ENST00000507650 TRAV6A0A075B6T7 132 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 CENPXA8MT69 81 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 FNDC10F2Z333 226 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 M0R2Z0 102 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 HYPMO75409 117 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 TAS2R30P59541 319 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 MGST2Q99735 147 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 RFNGQ9Y644 331 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 PKHD1P08F94 4074 aa11.45□□□□□ -0.58
HOXC4-203ENST00000507650 A0A087X0K7 114 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 OR5G3P0C626 314 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 SPINK13Q1W4C9 94 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 SAMD13Q5VXD3 122 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 GPR82Q96P67 336 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 NUDT15Q9NV35 164 aa11.44□□□□□ -0.58
HOXC4-203ENST00000507650 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
HOXC4-203ENST00000507650 LOC102723971A0A1B0GUV8 181 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 AGPAT2O15120 278 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
HOXC4-203ENST00000507650 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 CXCL3P19876 107 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 FGL1Q08830 312 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 IL15RAQ13261 267 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 TEPPQ6URK8 271 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 TMEM37Q8WXS4 190 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 IGF2BP2-AS1Q96M15 143 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 ARV1Q9H2C2 271 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 PKD1P98161 4303 aa11.43□□□□□ -0.58
HOXC4-203ENST00000507650 DYNC1H1Q14204 4646 aaKnown RBP11.42□□□□□ -0.58
HOXC4-203ENST00000507650 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
HOXC4-203ENST00000507650 RAP2BP61225 183 aa11.42□□□□□ -0.58
HOXC4-203ENST00000507650 SELENOTP62341 195 aa11.42□□□□□ -0.58
HOXC4-203ENST00000507650 ZNF431Q8TF32 576 aaPredicted RBP11.42□□□□□ -0.58
HOXC4-203ENST00000507650 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
HOXC4-203ENST00000507650 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 TMEM189A5PLL7 270 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 ZNF705GA8MUZ8 300 aaPredicted RBP11.41□□□□□ -0.58
HOXC4-203ENST00000507650 SLC17A3O00476 420 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 MGAT4CQ9UBM8 478 aa11.41□□□□□ -0.58
HOXC4-203ENST00000507650 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
HOXC4-203ENST00000507650 FAM24AA6NFZ4 105 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms