RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
SNF8-205ENST00000507302 M6PRP20645 277 aa11.31□□□□□ -0.6
SNF8-205ENST00000507302 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
SNF8-205ENST00000507302 OR2F1Q13607 317 aa11.31□□□□□ -0.6
SNF8-205ENST00000507302 RNASE12Q5GAN4 147 aaKnown RBP11.31□□□□□ -0.6
SNF8-205ENST00000507302 PPP1R14BQ96C90 147 aa11.31□□□□□ -0.6
SNF8-205ENST00000507302 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
SNF8-205ENST00000507302 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
SNF8-205ENST00000507302 HOXA5P20719 270 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 LINC00315P59091 139 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 NCS1P62166 190 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 SMCO1Q147U7 214 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 GGNBP1Q5YKI7 109 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 OR10J6PQ8NGY7 276 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
SNF8-205ENST00000507302 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 ZNF586Q9NXT0 402 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
SNF8-205ENST00000507302 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 C15orf40Q8WUR7 153 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 LINC01587Q99440 93 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
SNF8-205ENST00000507302 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
SNF8-205ENST00000507302 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
SNF8-205ENST00000507302 PITX3O75364 302 aa11.28□□□□□ -0.6
SNF8-205ENST00000507302 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
SNF8-205ENST00000507302 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
SNF8-205ENST00000507302 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
SNF8-205ENST00000507302 FRZBQ92765 325 aa11.28□□□□□ -0.6
SNF8-205ENST00000507302 VBP1P61758 197 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 DLK1P80370 383 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 OR5I1Q13606 314 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 EXTL2Q9UBQ6 330 aa11.27□□□□□ -0.61
SNF8-205ENST00000507302 FAM25AB3EWG3 89 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 FAM25CB3EWG5 89 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 FAM25GB3EWG6 89 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 H3BRN7 92 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 H7BYZ3 331 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 ATP6V1G2O95670 118 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
SNF8-205ENST00000507302 CXCL3P19876 107 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 KRTAP10-1P60331 282 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 FUNDC2Q9BWH2 189 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
SNF8-205ENST00000507302 A0A087X0K7 114 aa11.25□□□□□ -0.61
SNF8-205ENST00000507302 ADAP1O75689 374 aa11.25□□□□□ -0.61
SNF8-205ENST00000507302 CDKN1BP46527 198 aa11.25□□□□□ -0.61
SNF8-205ENST00000507302 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
SNF8-205ENST00000507302 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
SNF8-205ENST00000507302 A0A096LPF7 62 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 A0A0J9YY99 117 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
SNF8-205ENST00000507302 S100A7P31151 101 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 RAB11AP62491 216 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
SNF8-205ENST00000507302 PSG3Q16557 428 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 BPIFCQ8NFQ6 507 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 OR1S1Q8NH92 325 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
SNF8-205ENST00000507302 AKR1C4P17516 323 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 ORM2P19652 201 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNF8-205ENST00000507302 PLP1P60201 277 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 ERVFC1-1P60608 527 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 AP3S1Q92572 193 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 PRRT1Q99946 306 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
SNF8-205ENST00000507302 A0A087WXM4 84 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
SNF8-205ENST00000507302 AKAIN1P0CW23 69 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 SLC25A6P12236 298 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 HTN1P15515 57 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
SNF8-205ENST00000507302 RHOBP62745 196 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 OR51S1Q8NGJ8 323 aa11.22□□□□□ -0.61
SNF8-205ENST00000507302 A0A087WTM6 91 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 EREGO14944 169 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 SIVA1O15304 175 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 SRPXP78539 464 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
SNF8-205ENST00000507302 KIR3DS1Q14943 382 aa11.21□□□□□ -0.61
SNF8-205ENST00000507302 VCX3AQ9NNX9 186 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms