RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ACOT7LQ6ZUV0 252 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 TMEM147Q9BVK8 224 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
HMGCS1-204ENST00000507293 CNN1P51911 297 aaKnown RBP8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 LGALS9BQ3B8N2 356 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 IGFL4Q6B9Z1 124 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 CCDC190Q86UF4 302 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 OR4D5Q8NGN0 318 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 IGF2BP2-AS1Q96M15 143 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 TMEM208Q9BTX3 173 aa8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 STRAPQ9Y3F4 350 aaKnown RBP8.19□□□□□ -1.1
HMGCS1-204ENST00000507293 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 SMCO3A2RU48 225 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 A6NHS1 94 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 H3BRN7 92 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 M0R2Z0 102 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 DUSP14O95147 198 aaKnown RBP8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 S100A7P31151 101 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 DAD1P61803 113 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 FGL1Q08830 312 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 SPINK13Q1W4C9 94 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 OR11H7Q8NGC8 314 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 DEDD2Q8WXF8 326 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 GPR82Q96P67 336 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 FAT2Q9NYQ8 4349 aa8.18□□□□□ -1.1
HMGCS1-204ENST00000507293 ZNF705GA8MUZ8 300 aaPredicted RBP8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 CRXO43186 299 aaPredicted RBP8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 ADAP1O75689 374 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 INSP01308 110 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 PRM2P04554 102 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 POLR2GP62487 172 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 Q6ZR54 194 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 BAP18Q8IXM2 172 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 SLC25A39Q9BZJ4 359 aaPredicted RBP8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 DNAH17Q9UFH2 4485 aa8.17□□□□□ -1.1
HMGCS1-204ENST00000507293 C9orf170A2RU37 121 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 CCNKO75909 580 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 IL5P05113 134 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 LINC00869P0C866 280 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 RAP2BP61225 183 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 ID3Q02535 119 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 RNF212Q495C1 297 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 HIGD1AQ9Y241 93 aa8.16□□□□□ -1.1
HMGCS1-204ENST00000507293 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 PMS2P5A8MQ11 134 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 BOLA2-SMG1P6H3BVE0 249 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 SSSCA1O60232 199 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 HYPMO75409 117 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 OR5G3P0C626 314 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 RPL7P18124 248 aaKnown RBP8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 INPP1P49441 399 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 LINC00299Q6ZSB3 139 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 UHRF2Q96PU4 802 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 SRRQ9GZT4 340 aa8.15□□□□□ -1.1
HMGCS1-204ENST00000507293 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 A0A087X0K7 114 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 NDUFB6O95139 128 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 PLP1P60201 277 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 DLK1P80370 383 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 HIST1H1AQ02539 215 aaPredicted RBP8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 CNPY1Q3B7I2 92 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 SOHLH1Q5JUK2 328 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 TRIQKQ629K1 86 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 FLVCR2Q9UPI3 526 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 PCLOQ9Y6V0 5065 aa8.14□□□□□ -1.11
HMGCS1-204ENST00000507293 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 SCGB1D2O95969 90 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 OR4E1P0C645 316 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 METTL15P1P0C7V9 234 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 DEFB130BP0DP73 79 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 DEFB130AP0DP74 79 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 PRB4P10163 310 aaPredicted RBP8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 CXCL3P19876 107 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 AZU1P20160 251 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 TSPOP30536 169 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 B2MP61769 119 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 SELENOTP62341 195 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 RHOBP62745 196 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 FCN2Q15485 313 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 OR8A1Q8NGG7 326 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 S100ZQ8WXG8 99 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 SMIM8Q96KF7 97 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms