RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 RBPJQ06330 500 aa14.1□□□□□ -0.15
NUP54-205ENST00000507257 KIR3DS1Q14943 382 aa14.1□□□□□ -0.15
NUP54-205ENST00000507257 ZNF474Q6S9Z5 364 aaPredicted RBP14.1□□□□□ -0.15
NUP54-205ENST00000507257 TPSG1Q9NRR2 321 aa14.1□□□□□ -0.15
NUP54-205ENST00000507257 CHTOPQ9Y3Y2 248 aaKnown RBP14.1□□□□□ -0.15
NUP54-205ENST00000507257 F11RQ9Y624 299 aaKnown RBP14.1□□□□□ -0.15
NUP54-205ENST00000507257 PAX8Q06710 450 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 HCP5Q6MZN7 132 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 SCNM1Q9BWG6 230 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 NHLH1Q02575 133 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 DIAPH2-AS1Q14236 149 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 ALKBH2Q6NS38 261 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 NUP37Q8NFH4 326 aa14.09□□□□□ -0.15
NUP54-205ENST00000507257 TRBV19A0A075B6N1 114 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 H3BTX0 84 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 HBDP02042 147 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 IFI27P40305 119 aaPredicted RBP14.08□□□□□ -0.16
NUP54-205ENST00000507257 PSG3Q16557 428 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 FAM104BQ5XKR9 115 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 EXOC3-AS1Q8N2X6 119 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 FDCSPQ8NFU4 85 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 SIGLEC8Q9NYZ4 499 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 JKAMPQ9P055 326 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 PSG8Q9UQ74 426 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 CADP27708 2225 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 KNTC1P50748 2209 aa14.08□□□□□ -0.16
NUP54-205ENST00000507257 SHISA9B4DS77 424 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 H3BUT2 72 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 K7EM74 188 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 LPAL2Q16609 132 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 ARRDC1-AS1Q9H2J1 176 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 A0A1W2PPM0 123 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 SNAI2O43623 268 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 UQCRFS1P47985 274 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 DLX6P56179 175 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 LYZP61626 148 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 HES3Q5TGS1 186 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 SIGLEC15Q6ZMC9 328 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 COX8CQ7Z4L0 72 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 LHFPL4Q7Z7J7 247 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 ORMDL3Q8N138 153 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 GUCD1Q96NT3 240 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 SHANK2-AS3Q9BTD1 123 aa14.07□□□□□ -0.16
NUP54-205ENST00000507257 TNFRSF13BO14836 293 aaPredicted RBP14.06□□□□□ -0.16
NUP54-205ENST00000507257 FCN3O75636 299 aa14.06□□□□□ -0.16
NUP54-205ENST00000507257 PRELID3AQ96N28 172 aa14.06□□□□□ -0.16
NUP54-205ENST00000507257 SRSF8Q9BRL6 282 aaKnown RBP14.06□□□□□ -0.16
NUP54-205ENST00000507257 SERTM2A0A1B0GWG4 89 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 H3BRN7 92 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 CRIP1P50238 77 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 CCL11P51671 97 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 TNFRSF14Q92956 283 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 ABHD17AQ96GS6 310 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 RITA1Q96K30 269 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 HIGD1BQ9P298 99 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
NUP54-205ENST00000507257 URB1O60287 2271 aaKnown RBP14.05□□□□□ -0.16
NUP54-205ENST00000507257 D6R8Y8 96 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 ASCL5Q7RTU5 278 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 THYN1Q9P016 225 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 TECTAO75443 2155 aa14.05□□□□□ -0.16
NUP54-205ENST00000507257 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 TEX22C9J3V5 150 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 I3L2K1 104 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 CIDEAO60543 219 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 FAM106CPP0CH98 169 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 CACNG7P62955 275 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 LOXL1Q08397 574 aaPredicted RBP14.04□□□□□ -0.16
NUP54-205ENST00000507257 FAM106AQ4KMX7 169 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 DHRS13Q6UX07 377 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 RASL11BQ9BPW5 248 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 SIGLEC9Q9Y336 463 aa14.04□□□□□ -0.16
NUP54-205ENST00000507257 PPIAL4EA0A075B759 164 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 LINC01546A6NGU7 62 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 NDUFB3O43676 98 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 PPIAL4FP0DN26 164 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 CD40P25942 277 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 RIPPLY3P57055 190 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 Q71RC1 249 aaPredicted RBP14.03□□□□□ -0.16
NUP54-205ENST00000507257 IFI27L1Q96BM0 104 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 INSIG2Q9Y5U4 225 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 SPCS1Q9Y6A9 102 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 TMEM189A5PLL7 270 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 MRPS12O15235 138 aaKnown RBP14.03□□□□□ -0.16
NUP54-205ENST00000507257 PDE6HQ13956 83 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 PRO3102Q9H379 93 aa14.03□□□□□ -0.16
NUP54-205ENST00000507257 C17orf100A8MU93 164 aa14.02□□□□□ -0.16
NUP54-205ENST00000507257 TMEM178BH3BS89 294 aa14.02□□□□□ -0.16
NUP54-205ENST00000507257 KLK10O43240 276 aa14.02□□□□□ -0.16
NUP54-205ENST00000507257 FABP2P12104 132 aa14.02□□□□□ -0.16
NUP54-205ENST00000507257 NBEAQ8NFP9 2946 aa14.02□□□□□ -0.17
NUP54-205ENST00000507257 CELSR3Q9NYQ7 3312 aa14.02□□□□□ -0.17
NUP54-205ENST00000507257 FBLL1A6NHQ2 334 aaKnown RBP14.02□□□□□ -0.17
NUP54-205ENST00000507257 CEACAM4O75871 244 aa14.02□□□□□ -0.17
NUP54-205ENST00000507257 IGKV1-17P01599 117 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms