RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 SRD5A3Q9H8P0 318 aa7.05□□□□□ -1.28
CLCN3-205ENST00000506924 RABAC1Q9UI14 185 aa7.05□□□□□ -1.28
CLCN3-205ENST00000506924 IGSF23A1L1A6 192 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 DNASE2O00115 360 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-205ENST00000506924 TNFRSF6BO95407 300 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-205ENST00000506924 BMI1P35226 326 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 DLK1P80370 383 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 SLC38A11Q08AI6 406 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 TMEM144Q7Z5S9 345 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 APRG1Q8IVJ8 170 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 FAM24BQ8N5W8 94 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 STXBP6Q8NFX7 210 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 NARS2Q96I59 477 aaKnown RBP7.04□□□□□ -1.28
CLCN3-205ENST00000506924 SPAG8Q99932 426 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-205ENST00000506924 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 OR5AC2Q9NZP5 309 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 DOK5Q9P104 306 aa7.04□□□□□ -1.28
CLCN3-205ENST00000506924 A0A1W2PS18 150 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 RBMY1BA6NDE4 496 aaKnown RBP7.03□□□□□ -1.28
CLCN3-205ENST00000506924 RBMY1EA6NEQ0 496 aaKnown RBP7.03□□□□□ -1.28
CLCN3-205ENST00000506924 OR4C46A6NHA9 309 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 DEDDO75618 318 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 FABP1P07148 127 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 RBMY1DP0C7P1 496 aaKnown RBP7.03□□□□□ -1.28
CLCN3-205ENST00000506924 NHLRC4P0CG21 123 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-205ENST00000506924 ORM2P19652 201 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 CXCL3P19876 107 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 ODF3L2Q3SX64 289 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 C16orf54Q6UWD8 224 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 CYP2G1PQ6ZSU1 146 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 TMEM252Q8N6L7 170 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 OR1B1Q8NGR6 318 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 PPP1R14BQ96C90 147 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 GRAMD2BQ96HH9 432 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 NMES1Q9C002 83 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 TMEM231Q9H6L2 316 aa7.03□□□□□ -1.28
CLCN3-205ENST00000506924 LYRM2Q9NU23 88 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-205ENST00000506924 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 BUB3O43684 328 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 RLN2P04090 185 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 EIF2B2P49770 351 aaKnown RBP7.02□□□□□ -1.29
CLCN3-205ENST00000506924 PAFAH1B2P68402 229 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 FCN2Q15485 313 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 HAGHQ16775 308 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 RGS21Q2M5E4 152 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 LEMD1Q68G75 181 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 BPIFCQ8NFQ6 507 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 PPP1R1CQ8WVI7 109 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 NPVFQ9HCQ7 196 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 RETNQ9HD89 108 aa7.02□□□□□ -1.29
CLCN3-205ENST00000506924 UBE2L5PA0A1B0GUS4 154 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 A8MZ25 164 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 E5RGE8 158 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 ZNF688P0C7X2 276 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 LINC00869P0C866 280 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 RPL35AP18077 110 aaKnown RBP7.01□□□□□ -1.29
CLCN3-205ENST00000506924 SULT1A1P50225 295 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 CYCSP99999 105 aaKnown RBP7.01□□□□□ -1.29
CLCN3-205ENST00000506924 STX12Q86Y82 276 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 NTN5Q8WTR8 489 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-205ENST00000506924 MGST2Q99735 147 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 RNF126Q9BV68 326 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 MED28Q9H204 178 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 SLC25A22Q9H936 323 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
CLCN3-205ENST00000506924 K7EQG2 157 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 AGPAT2O15120 278 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 MPC2O95563 127 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 OR5G3P0C626 314 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 DEFB131AP59861 70 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 EWSR1Q01844 656 aaKnown RBP eCLIP7□□□□□ -1.29
CLCN3-205ENST00000506924 CLINT1Q14677 625 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 TMEM88Q6PEY1 159 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 LINC00322Q6ZN03 302 aaPredicted RBP7□□□□□ -1.29
CLCN3-205ENST00000506924 OR8I2Q8N0Y5 310 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 OR11H7Q8NGC8 314 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 UHRF2Q96PU4 802 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 FAM110AQ9BQ89 295 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 TMEM147Q9BVK8 224 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 GGACTQ9BVM4 153 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 SCRT1Q9BWW7 348 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 ARL6Q9H0F7 186 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 UQCC1Q9NVA1 299 aa7□□□□□ -1.29
CLCN3-205ENST00000506924 DNAH9Q9NYC9 4486 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 LOC102724200A0A096LPH7 203 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-205ENST00000506924 HELTA6NFD8 242 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 ZNF98A6NK75 572 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 FNDC10F2Z333 226 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 HYPMO75409 117 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 CD5P06127 495 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 S100A11P31949 105 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 CAMLGP49069 296 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 HBG1P69891 147 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 HBG2P69892 147 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 BAXQ07812 192 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 OXA1LQ15070 435 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 MIC13Q5XKP0 118 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 PATE2Q6UY27 113 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms