RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SRRQ9GZT4 340 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 C20orf85Q9H1P6 137 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 DNAJC4Q9NNZ3 241 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 HEYLQ9NQ87 328 aaPredicted RBP2.17□□□□□ -2.06
TCOF1-208ENST00000506063 NDUFA4L2Q9NRX3 87 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.17□□□□□ -2.06
TCOF1-208ENST00000506063 SHPKQ9UHJ6 478 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 PFDN2Q9UHV9 154 aa2.17□□□□□ -2.06
TCOF1-208ENST00000506063 IGHV3OR16-13A0A075B7E8 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TRAV30A0A087WSZ9 112 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IGHV3-21A0A0B4J1V1 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IGHV3-74A0A0B4J1X5 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TEX50A0A1B0GTY4 177 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 A0A1B0GU03 582 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 LOC102723971A0A1B0GUV8 181 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 FAM240BA0A1B0GVZ2 78 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 SMCO3A2RU48 225 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 CGB1A6NKQ9 187 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 FAM90A26D6RGX4 464 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 NPIPB6E9PJ23 425 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 INS-IGF2F8WCM5 200 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 K7EIM0 57 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 LYRM1O43325 122 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 NDUFB6O95139 128 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 CDS2O95674 445 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 SCGB1D2O95969 90 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 MT-CO2P00403 227 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IGKV1-39P01597 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IGKV1-5P01602 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 APOHP02749 345 aaPredicted RBP2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IGKV1D-39P04432 117 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 PRM2P04554 102 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IAPPP10997 89 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IL7P13232 177 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 PVALBP20472 110 aaPredicted RBP2.16□□□□□ -2.06
TCOF1-208ENST00000506063 RND2P52198 227 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 BRWD1-AS2P59051 145 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 PAFAH1B2P68402 229 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 DHRS2Q13268 280 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 PPP1R1AQ13522 171 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 FCN2Q15485 313 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 IZUMO4Q1ZYL8 232 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 SAMD13Q5VXD3 122 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF600Q6ZNG1 722 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 LINC00299Q6ZSB3 139 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TCF24Q7RTU0 167 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 S100A7AQ86SG5 101 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF709Q8N972 641 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM116Q8NCL8 245 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 OR52E5Q8NH55 327 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 RNASEH2CQ8TDP1 164 aaKnown RBP2.16□□□□□ -2.06
TCOF1-208ENST00000506063 DCANP1Q8TF63 244 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 SCARB1Q8WTV0 552 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 RAB40CQ96S21 281 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TXN2Q99757 166 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 VSIRQ9H7M9 311 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 NUDT15Q9NV35 164 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 MSRB1Q9NZV6 116 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 MGAT4CQ9UBM8 478 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 GPR132Q9UNW8 380 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM56-RWDD3S4R434 201 aa2.16□□□□□ -2.06
TCOF1-208ENST00000506063 TRAV6A0A075B6T7 132 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 TRAV26-1A0A087WT03 109 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 A0A096LPF7 62 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 A0A0G2JRQ6 117 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 HELTA6NFD8 242 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ZFP92A6NM28 416 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 FAM25EA8MYX2 175 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 H3BMM0 161 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 H3BP45 60 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 I3L2K1 104 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 L7N2F9 121 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 DNASE2O00115 360 aaPredicted RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 SSSCA1O60232 199 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 CLN5O75503 358 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 NXPH4O95158 308 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 SFT2D2O95562 160 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 IL4P05112 153 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ATP5G1P05496 136 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 HOXB5P09067 269 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 OR4E1P0C645 316 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ZNF688P0C7X2 276 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 PET100P0DJ07 73 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 RNASE2P10153 161 aaKnown RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 SLC25A6P12236 298 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 LORP23490 312 aaPredicted RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 OR10J1P30954 320 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 NKX2-1P43699 371 aaPredicted RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ATP5G3P48201 142 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ATP5IP56385 69 aaPredicted RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 S100A10P60903 97 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 LYZP61626 148 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 SNRPD3P62318 126 aaKnown RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 RPL11P62913 178 aaKnown RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 VAMP2P63027 116 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 ASAH1Q13510 395 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 IAH1Q2TAA2 248 aaPredicted RBP2.15□□□□□ -2.07
TCOF1-208ENST00000506063 AARDQ4LEZ3 155 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 C2orf83Q53S99 150 aa2.15□□□□□ -2.07
TCOF1-208ENST00000506063 NMSQ5H8A3 153 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms