RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FABP12A6NFH5 140 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 SYNGR2O43760 224 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 NUDT3O95989 172 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 RHOBP62745 196 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 SPINK13Q1W4C9 94 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 C6orf223Q8N319 242 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 DEDD2Q8WXF8 326 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 STRAPQ9Y3F4 350 aaKnown RBP14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 DNAH6Q9C0G6 4158 aa14.88□□□□□ -0.03
SQSTM1-210ENST00000506042 BOLA2-SMG1P6H3BVE0 249 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 WRBO00258 174 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 SELENOTP62341 195 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 OR11H7Q8NGC8 314 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 OR10J6PQ8NGY7 276 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 C16orf74Q96GX8 76 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 SLC25A21Q9BQT8 299 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 PLA2G2EQ9NZK7 142 aa14.87□□□□□ -0.03
SQSTM1-210ENST00000506042 NBDYA0A0U1RRE5 68 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 CBY3A6NI87 242 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 PITX3O75364 302 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 IL5P05113 134 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 TTC32Q5I0X7 151 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 SPANXN5Q5MJ07 72 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 ZNF575Q86XF7 245 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 LRTM2Q8N967 370 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 LINC01587Q99440 93 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 HIGD1AQ9Y241 93 aa14.86□□□□□ -0.03
SQSTM1-210ENST00000506042 MUC4Q99102 2169 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 SMCO3A2RU48 225 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 ZNF705GA8MUZ8 300 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 M0R2Z0 102 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 CDK2AP2O75956 126 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 TAS2R60P59551 318 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 ZNF493Q6ZR52 646 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 TOMM5Q8N4H5 51 aa14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 TIMM8BQ9Y5J9 83 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-210ENST00000506042 SPCS2Q15005 226 aa14.84□□□□□ -0.03
SQSTM1-210ENST00000506042 TMEM144Q7Z5S9 345 aa14.84□□□□□ -0.03
SQSTM1-210ENST00000506042 IGKV1OR2-108A0A075B7D4 117 aa14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 HYPMO75409 117 aa14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 TMBIM6P55061 237 aa14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 HIST1H1AQ02539 215 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 CCDC28AQ8IWP9 274 aa14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 C20orf173Q96LM9 149 aa14.83□□□□□ -0.04
SQSTM1-210ENST00000506042 OR5G3P0C626 314 aa14.82□□□□□ -0.04
SQSTM1-210ENST00000506042 SMIM18P0DKX4 95 aa14.82□□□□□ -0.04
SQSTM1-210ENST00000506042 C20orf144Q9BQM9 153 aa14.82□□□□□ -0.04
SQSTM1-210ENST00000506042 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-210ENST00000506042 H3BRN7 92 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 HTN1P15515 57 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 ANXA7P20073 488 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 PXDC1Q5TGL8 231 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 CYP2G1PQ6ZSU1 146 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 ACOT7LQ6ZUV0 252 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 BAP18Q8IXM2 172 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 MCFD2Q8NI22 146 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 DYNC2LI1Q8TCX1 351 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 SHANK2-AS3Q9BTD1 123 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
SQSTM1-210ENST00000506042 CXCL2P19875 107 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 CDKN1BP46527 198 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 UBE2MP61081 183 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 PYDC2Q56P42 97 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 RNF182Q8N6D2 247 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 OR8A1Q8NGG7 326 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 MGAT4CQ9UBM8 478 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 PCLOQ9Y6V0 5065 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 KIAA1109Q2LD37 5005 aa14.8□□□□□ -0.04
SQSTM1-210ENST00000506042 H7BYZ3 331 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 SFT2D2O95562 160 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 HOXB5P09067 269 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 LINC00869P0C866 280 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 S100A5P33763 92 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 ZNRF2Q8NHG8 242 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 TMEM263Q8WUH6 116 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 SLC50A1Q9BRV3 221 aa14.79□□□□□ -0.04
SQSTM1-210ENST00000506042 TRAV12-2A0A075B6T6 113 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 A0A087X0K7 114 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 CRXO43186 299 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 TNFSF8P32971 234 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 INPP1P49441 399 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 TNP2Q05952 138 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 PSG3Q16557 428 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 LCN15Q6UWW0 184 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 MAPKAPK5-AS1Q8N8E1 139 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 GNPNAT1Q96EK6 184 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 PSENENQ9NZ42 101 aa14.78□□□□□ -0.04
SQSTM1-210ENST00000506042 PRSS46E5RG02 174 aa14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 H3BP45 60 aa14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 BTF3P20290 206 aaKnown RBP14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 GATA2P23769 480 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 PLP1P60201 277 aa14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 ZNF503Q96F45 646 aa14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 NPVFQ9HCQ7 196 aa14.77□□□□□ -0.05
SQSTM1-210ENST00000506042 SNURFLB1AK76 121 aa14.76□□□□□ -0.05
SQSTM1-210ENST00000506042 FNDC10F2Z333 226 aa14.76□□□□□ -0.05
SQSTM1-210ENST00000506042 CXCL3P19876 107 aa14.76□□□□□ -0.05
SQSTM1-210ENST00000506042 SSX7Q7RTT5 188 aa14.76□□□□□ -0.05
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