RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PCTPQ9UKL6 214 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 BIRC6Q9NR09 4857 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 XIRP1Q702N8 1843 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 PLXNA4Q9HCM2 1894 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 ABCA2Q9BZC7 2435 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 CEP192Q8TEP8 1941 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 ANKRD30AQ9BXX3 1397 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 SCN8AQ9UQD0 1980 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 CHD6Q8TD26 2715 aa0.79□□□□□ -2.28
TOPBP1-204ENST00000505804 ABCA12Q86UK0 2595 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 BDP1A6H8Y1 2624 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 ANKRD17O75179 2603 aaKnown RBP0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 MYO5AQ9Y4I1 1855 aaKnown RBP0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 DUXBA0A1W2PPF3 345 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 GNG14A0A1W2PPG7 69 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 C7orf71A4D174 169 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 M0R378 163 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 TRGC2P03986 189 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 ZNF93P35789 620 aaPredicted RBP0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 UBE2BP63146 152 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 SPANXN5Q5MJ07 72 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 C22orf39Q6P5X5 142 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 AKAP14Q86UN6 197 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 FAM24BQ8N5W8 94 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 OR13D1Q8NGV5 346 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 OR10K1Q8NGX5 313 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 OR2T10Q8NGZ9 312 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 CANT1Q8WVQ1 401 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 YPEL2Q96QA6 119 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 DDA1Q9BW61 102 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 NHP2Q9NX24 153 aaKnown RBP0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 TECPR2O15040 1411 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 CEP164Q9UPV0 1460 aa0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 FASNP49327 2511 aaKnown RBP0.78□□□□□ -2.28
TOPBP1-204ENST00000505804 FER1L6Q2WGJ9 1857 aa0.78□□□□□ -2.29
TOPBP1-204ENST00000505804 NCOR2Q9Y618 2525 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 ANKRD11Q6UB99 2663 aaPredicted RBP0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 TRGV10A0A0A0MS01 117 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 A0A1W2PRE2 83 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 MAP1LC3B2A6NCE7 125 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 TLCD2A6NGC4 264 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 NDUFB3O43676 98 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 OR2T1O43869 369 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 OR1I1O60431 355 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 IFNA21P01568 189 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 OGNP20774 298 aaKnown RBP0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 NFYBP25208 207 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 INSL3P51460 131 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 DYNLT1P63172 113 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 RHOGP84095 191 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 LTC4SQ16873 150 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 BRMS1LQ5PSV4 323 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 DCUN1D2Q6PH85 259 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 SOSTDC1Q6X4U4 206 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 TAC4Q86UU9 113 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 PHF13Q86YI8 300 aaPredicted RBP0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 C3orf56Q8N813 242 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 SLC30A7Q8NEW0 376 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 NUP35Q8NFH5 326 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 GPX7Q96SL4 187 aaPredicted RBP0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 PRADC1Q9BSG0 188 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 RTL8AQ9BWD3 113 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 MAP1LC3BQ9GZQ8 125 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 TMEM126AQ9H061 195 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 TAS2R4Q9NYW5 299 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 OR52A1Q9UKL2 312 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 KLK9Q9UKQ9 250 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 NDUFAF1Q9Y375 327 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 NISCHQ9Y2I1 1504 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 FRMPD1Q5SYB0 1578 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 DOPEY1Q5JWR5 2465 aa0.77□□□□□ -2.29
TOPBP1-204ENST00000505804 RYR3Q15413 4870 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 LAMA2P24043 3122 aaKnown RBP0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 TNRC18O15417 2968 aaPredicted RBP0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 SETBP1Q9Y6X0 1596 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 ARHGEF11O15085 1522 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 LOC110117498A0A087WWA1 95 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 TIMM17BO60830 172 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 PFDN1O60925 122 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 PIAS1O75925 651 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 IFNA14P01570 189 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 BAALC-AS2P0C853 105 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 MGST1P10620 155 aaKnown RBP0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 MIFP14174 115 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 SSR2P43308 183 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 DYNLT3P51808 116 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 PDE6HQ13956 83 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 ESRGQ1W209 222 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 FKBP1CQ5VVH2 108 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 PDZD9Q8IXQ8 264 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 IFT20Q8IY31 132 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 DYDC1Q8WWB3 177 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 TEX37Q96LM6 180 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 LINC00467Q9BRT7 94 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 BCL2L10Q9HD36 194 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 HS3ST2Q9Y278 367 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 ITPR3Q14573 2671 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 MYO18BQ8IUG5 2567 aa0.76□□□□□ -2.29
TOPBP1-204ENST00000505804 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms