RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 JTBO76095 146 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 HNRNPCP07910 306 aaKnown RBP eCLIP3.68□□□□□ -1.82
LMNB1-208ENST00000504788 ORM2P19652 201 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 NPPCP23582 126 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 LYZP61626 148 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 SERF2P84101 59 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 ODF3L2Q3SX64 289 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 C1orf194Q5T5A4 169 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 LEMD1Q68G75 181 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 LINC00322Q6ZN03 302 aaPredicted RBP3.68□□□□□ -1.82
LMNB1-208ENST00000504788 LINC00305Q7Z4B0 112 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 HSD17B11Q8NBQ5 300 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 OR2K2Q8NGT1 345 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 SUN5Q8TC36 379 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 GATAD1Q8WUU5 269 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 ARPC5LQ9BPX5 153 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 MCRIP2Q9BUT9 160 aaKnown RBP3.68□□□□□ -1.82
LMNB1-208ENST00000504788 ARL6Q9H0F7 186 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 SLC25A32Q9H2D1 315 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 DNAJC4Q9NNZ3 241 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 RPRMQ9NS64 109 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 RABAC1Q9UI14 185 aa3.68□□□□□ -1.82
LMNB1-208ENST00000504788 ELOA3CA0A087WX78 387 aaPredicted RBP3.67□□□□□ -1.82
LMNB1-208ENST00000504788 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 TRAV25A0A0B4J276 109 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 H3BQ15 152 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 EIF3GO75821 320 aaKnown RBP eCLIP3.67□□□□□ -1.82
LMNB1-208ENST00000504788 NDUFB4O95168 129 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 RAB2AP61019 212 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 ZFP69Q49AA0 526 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 MIR17HGQ75NE6 70 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 OR1B1Q8NGR6 318 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 METTL26Q96S19 204 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 FAM110AQ9BQ89 295 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 PBDC1Q9BVG4 233 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 SLC25A2Q9BXI2 301 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 DOK5Q9P104 306 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 NBEAL2Q6ZNJ1 2754 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 A0A087X0K7 114 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 TRAV2A0A0B4J234 112 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 K7EIL1 84 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 SLC17A3O00476 420 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 HYPMO75409 117 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 CD7P09564 240 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 SEC11BP0C7V7 166 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 M6PRP20645 277 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 FHITP49789 147 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 C10orf113Q5VZT2 155 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 TCF24Q7RTU0 167 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 BAP18Q8IXM2 172 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 FXYD5Q96DB9 178 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 SPAG8Q99932 426 aaPredicted RBP3.67□□□□□ -1.82
LMNB1-208ENST00000504788 WFDC10AQ9H1F0 79 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 MS4A6AQ9H2W1 248 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 HRH4Q9H3N8 390 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 ZNF586Q9NXT0 402 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 TMEM14CQ9P0S9 112 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 HIGD1AQ9Y241 93 aa3.67□□□□□ -1.82
LMNB1-208ENST00000504788 A0A1W2PS18 150 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 A8MTW9 85 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 A8MZ25 164 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 EIF4EBP3O60516 100 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-208ENST00000504788 IFNA5P01569 189 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 PRB2P02812 416 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-208ENST00000504788 FABP1P07148 127 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 STAG3L2P0CL84 134 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 STAG3L3P0CL85 134 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 PYYP10082 97 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 RAB31Q13636 194 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 FFAR4Q5NUL3 377 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 FAM78BQ5VT40 261 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 SIGLEC15Q6ZMC9 328 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 Q6ZRG5 221 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 SLC51BQ86UW2 128 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 GNPNAT1Q96EK6 184 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-208ENST00000504788 C20orf173Q96LM9 149 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 PFDN5Q99471 154 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 AURKAIP1Q9NWT8 199 aaPredicted RBP3.66□□□□□ -1.82
LMNB1-208ENST00000504788 FUT9Q9Y231 359 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 TGP01266 2768 aa3.66□□□□□ -1.82
LMNB1-208ENST00000504788 C17orf112F2Z3M2 114 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 SCGB2A1O75556 95 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 CD5P06127 495 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 GIG44P09565 113 aaPredicted RBP3.65□□□□□ -1.82
LMNB1-208ENST00000504788 NUP62P37198 522 aaPredicted RBP3.65□□□□□ -1.82
LMNB1-208ENST00000504788 DEFB1P60022 68 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 ZNF124Q15973 351 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 GDF5OSQ5U4N7 250 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 OR1L4Q8NGR5 311 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 SCGB1C1Q8TD33 95 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 TMED6Q8WW62 240 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 RAB24Q969Q5 203 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 GRAMD2BQ96HH9 432 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 PRR25Q96S07 402 aa3.65□□□□□ -1.82
LMNB1-208ENST00000504788 ZNF471Q9BX82 626 aaPredicted RBP3.65□□□□□ -1.82
LMNB1-208ENST00000504788 MRPL32Q9BYC8 188 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms