RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 TMEM256Q8N2U0 113 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 OR1S1Q8NH92 325 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 C16orf74Q96GX8 76 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 GPR82Q96P67 336 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 LINC01587Q99440 93 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 PRRT1Q99946 306 aa11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 SLC25A39Q9BZJ4 359 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-208ENST00000504101 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 HTN1P15515 57 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 TAS2R60P59551 318 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 RAB11AP62491 216 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 MRPS10P82664 201 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 FGL1Q08830 312 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 TIMM8BQ9Y5J9 83 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-208ENST00000504101 IAPPP10997 89 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 AKR1C4P17516 323 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 ORM2P19652 201 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 SMIM4Q8WVI0 70 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 TMEM147Q9BVK8 224 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 FAT1Q14517 4588 aa11.72□□□□□ -0.53
POLR2J3-208ENST00000504101 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 A0A1W2PPQ1 181 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 GATA2P23769 480 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 S100A7P31151 101 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 RHOBP62745 196 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 DLK1P80370 383 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 OR5I1Q13606 314 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 CLVS1Q8IUQ0 354 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 OR10J6PQ8NGY7 276 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 NOP10Q9NPE3 64 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 PPP1R14DQ9NXH3 145 aa11.71□□□□□ -0.53
POLR2J3-208ENST00000504101 SRPXP78539 464 aa11.7□□□□□ -0.54
POLR2J3-208ENST00000504101 RXFP4Q8TDU9 374 aa11.7□□□□□ -0.54
POLR2J3-208ENST00000504101 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
POLR2J3-208ENST00000504101 MIXL1Q9H2W2 232 aa11.7□□□□□ -0.54
POLR2J3-208ENST00000504101 A0A0J9YY99 117 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 RGS5O15539 181 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 ANXA3P12429 323 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 M6PRP20645 277 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 ZNF493Q6ZR52 646 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 NAA50Q9GZZ1 169 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-208ENST00000504101 H3BRN7 92 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 PITX3O75364 302 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 AKR1C1Q04828 323 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 CTF1Q16619 201 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 SCP2D1Q9UJQ7 156 aa11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-208ENST00000504101 PRSS46E5RG02 174 aa11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 ZNF701M0R085 212 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 ADAP1O75689 374 aa11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 RPL7P18124 248 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 CXCL3P19876 107 aa11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 CDKN1BP46527 198 aa11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 ESRGQ1W209 222 aa11.67□□□□□ -0.54
POLR2J3-208ENST00000504101 MYCBP2O75592 4640 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 PIGBOS1A0A0B4J2F0 54 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 H7BYZ3 331 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 MED6O75586 246 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 LINC00315P59091 139 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 IL18Q14116 193 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 CIB3Q96Q77 187 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
POLR2J3-208ENST00000504101 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 CTDSP2O14595 271 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 CTDSPLO15194 276 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 HOXA5P20719 270 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 RAP2BP61225 183 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 PSG3Q16557 428 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 ACOT7LQ6ZUV0 252 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 PTTG2Q9NZH5 202 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
POLR2J3-208ENST00000504101 A0A087X0K7 114 aa11.64□□□□□ -0.55
POLR2J3-208ENST00000504101 H3BNG1 76 aa11.64□□□□□ -0.55
POLR2J3-208ENST00000504101 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
POLR2J3-208ENST00000504101 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms