RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 GATAD1Q8WUU5 269 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 TUBA4BQ9H853 241 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 UBQLN2Q9UHD9 624 aa8.3□□□□□ -1.08
VCAN-205ENST00000503923 RPL7P18124 248 aaKnown RBP8.29□□□□□ -1.08
VCAN-205ENST00000503923 SAMD13Q5VXD3 122 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 LEMD1Q68G75 181 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 ST6GAL2Q96JF0 529 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 RSG1Q9BU20 258 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 MFFQ9GZY8 342 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 MAP6D1Q9H9H5 199 aa8.29□□□□□ -1.08
VCAN-205ENST00000503923 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
VCAN-205ENST00000503923 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 HMSDA8MTL9 139 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 TAAR5O14804 337 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 FRMD6-AS1P0C7T7 363 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
VCAN-205ENST00000503923 MEOX2P50222 304 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
VCAN-205ENST00000503923 ZNF345Q14585 488 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 TCTE3Q8IZS6 198 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 FAM24BQ8N5W8 94 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 OR11H4Q8NGC9 324 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 B9D2Q9BPU9 175 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 TIMM9Q9Y5J7 89 aa8.28□□□□□ -1.08
VCAN-205ENST00000503923 ZNF688P0C7X2 276 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 ID1P41134 155 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 DEFB131AP59861 70 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 GCSAMLQ5JQS6 135 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 FFAR4Q5NUL3 377 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 MORN5Q5VZ52 161 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 AKAP14Q86UN6 197 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 HSD17B11Q8NBQ5 300 aa8.27□□□□□ -1.09
VCAN-205ENST00000503923 A0A087X0K7 114 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 TRAV5A0A0B4J249 113 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 A0A0D9SG52 128 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 ISLRO14498 428 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 SOCS3O14543 225 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 MRPS12O15235 138 aaKnown RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 JTBO76095 146 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 PSMB3P49720 205 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 ACOT6Q3I5F7 207 aaPredicted RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 RPL7L1Q6DKI1 246 aaKnown RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 LINC00322Q6ZN03 302 aaPredicted RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 KCNRGQ8N5I3 272 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 C16orf92Q96LL3 132 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 CITED4Q96RK1 184 aa8.26□□□□□ -1.09
VCAN-205ENST00000503923 PSMG3Q9BT73 122 aaPredicted RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 MRPL32Q9BYC8 188 aaKnown RBP8.26□□□□□ -1.09
VCAN-205ENST00000503923 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 LOC102724200A0A096LPH7 203 aaPredicted RBP8.25□□□□□ -1.09
VCAN-205ENST00000503923 RBMY1BA6NDE4 496 aaKnown RBP8.25□□□□□ -1.09
VCAN-205ENST00000503923 RBMY1EA6NEQ0 496 aaKnown RBP8.25□□□□□ -1.09
VCAN-205ENST00000503923 RBMY1DP0C7P1 496 aaKnown RBP8.25□□□□□ -1.09
VCAN-205ENST00000503923 CXCL2P19875 107 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 ATP6V0CP27449 155 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 OR2G3Q8NGZ4 309 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 GNPNAT1Q96EK6 184 aaPredicted RBP8.25□□□□□ -1.09
VCAN-205ENST00000503923 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 ARPC5LQ9BPX5 153 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 FUT9Q9Y231 359 aa8.25□□□□□ -1.09
VCAN-205ENST00000503923 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 KANTRA0A1W2PQU2 76 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 C1QBP02746 253 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 NHLRC4P0CG21 123 aaPredicted RBP8.24□□□□□ -1.09
VCAN-205ENST00000503923 IGLC2P0DOY2 106 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 M6PRP20645 277 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 RHOBP62745 196 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 SERF2P84101 59 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 ZNF124Q15973 351 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 SPATA31B1PQ5VZV4 182 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 LCN15Q6UWW0 184 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 MIR17HGQ75NE6 70 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 SBSPONQ8IVN8 264 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 LINC00052Q96N35 136 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 ASCL2Q99929 193 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 HRH4Q9H3N8 390 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 TMEM14CQ9P0S9 112 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
VCAN-205ENST00000503923 MBP02144 154 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 APOC4P55056 127 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 TAS2R45P59539 299 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 GUK1Q16774 197 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 HAGHQ16775 308 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 STHQ8IWL8 128 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 LRRC20Q8TCA0 184 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 HYLS1Q96M11 299 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 SLC25A2Q9BXI2 301 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
VCAN-205ENST00000503923 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 KIR2DL5BA0A0G2JN68 375 aa8.22□□□□□ -1.09
VCAN-205ENST00000503923 KIR2DL5BA0A0G2JPC4 375 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms