RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 NBEAL2Q6ZNJ1 2754 aa12.27□□□□□ -0.45
SCLT1-205ENST00000503401 AGRNO00468 2067 aa12.27□□□□□ -0.45
SCLT1-205ENST00000503401 K7EQG2 157 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 IFNA5P01569 189 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 C10orf113Q5VZT2 155 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 ARPC5O15511 151 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 ZNF709Q8N972 641 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
SCLT1-205ENST00000503401 ELOA3CA0A087WX78 387 aaPredicted RBP12.25□□□□□ -0.45
SCLT1-205ENST00000503401 TRAV2A0A0B4J234 112 aa12.25□□□□□ -0.45
SCLT1-205ENST00000503401 RBMY1BA6NDE4 496 aaKnown RBP12.25□□□□□ -0.45
SCLT1-205ENST00000503401 RBMY1EA6NEQ0 496 aaKnown RBP12.25□□□□□ -0.45
SCLT1-205ENST00000503401 RBMY1DP0C7P1 496 aaKnown RBP12.25□□□□□ -0.45
SCLT1-205ENST00000503401 S100A7P31151 101 aa12.25□□□□□ -0.45
SCLT1-205ENST00000503401 DEFB131AP59861 70 aa12.25□□□□□ -0.45
SCLT1-205ENST00000503401 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
SCLT1-205ENST00000503401 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
SCLT1-205ENST00000503401 A8MZ25 164 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 C1QBP02746 253 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 GALR1P47211 349 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 OR1L4Q8NGR5 311 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 C17orf77Q96MU5 243 aa12.24□□□□□ -0.45
SCLT1-205ENST00000503401 TRAV5A0A0B4J249 113 aa12.23□□□□□ -0.45
SCLT1-205ENST00000503401 SNRPCP09234 159 aaKnown RBP12.23□□□□□ -0.45
SCLT1-205ENST00000503401 PFDN5Q99471 154 aa12.23□□□□□ -0.45
SCLT1-205ENST00000503401 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 FAM110AQ9BQ89 295 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 SOCS3O14543 225 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
SCLT1-205ENST00000503401 ZNF266Q14584 549 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 FFAR4Q5NUL3 377 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 GPR82Q96P67 336 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-205ENST00000503401 MFFQ9GZY8 342 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 KCNIP2Q9NS61 270 aa12.22□□□□□ -0.45
SCLT1-205ENST00000503401 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.46
SCLT1-205ENST00000503401 ATF4P18848 351 aaPredicted RBP12.21□□□□□ -0.46
SCLT1-205ENST00000503401 SPATA31B1PQ5VZV4 182 aa12.21□□□□□ -0.46
SCLT1-205ENST00000503401 RPL7L1Q6DKI1 246 aaKnown RBP12.21□□□□□ -0.46
SCLT1-205ENST00000503401 LINC00322Q6ZN03 302 aaPredicted RBP12.21□□□□□ -0.46
SCLT1-205ENST00000503401 GATAD1Q8WUU5 269 aa12.21□□□□□ -0.46
SCLT1-205ENST00000503401 LINC00052Q96N35 136 aa12.21□□□□□ -0.46
SCLT1-205ENST00000503401 SEPSECSQ9HD40 501 aaKnown RBP12.21□□□□□ -0.46
SCLT1-205ENST00000503401 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
SCLT1-205ENST00000503401 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
SCLT1-205ENST00000503401 CMC4P56277 68 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-205ENST00000503401 DEFB1P60022 68 aa12.2□□□□□ -0.46
SCLT1-205ENST00000503401 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
SCLT1-205ENST00000503401 HAGHQ16775 308 aa12.2□□□□□ -0.46
SCLT1-205ENST00000503401 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
SCLT1-205ENST00000503401 IGFL4Q6B9Z1 124 aa12.2□□□□□ -0.46
SCLT1-205ENST00000503401 KNCNA6PVL3 124 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 H3BTX0 84 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 ZFP69Q49AA0 526 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 MIR17HGQ75NE6 70 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 C16orf92Q96LL3 132 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-205ENST00000503401 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCLT1-205ENST00000503401 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 BPIFA4PQ86YQ2 179 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 HYLS1Q96M11 299 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 SH3BGRL3Q9H299 93 aa12.19□□□□□ -0.46
SCLT1-205ENST00000503401 HMSDA8MTL9 139 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 CXCL2P19875 107 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 ID1P41134 155 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 PSMB3P49720 205 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 MEOX2P50222 304 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 ACTL10Q5JWF8 245 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
SCLT1-205ENST00000503401 A0A087X0K7 114 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 TRAV8-2A0A0B4J237 113 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 H3BQ15 152 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 ISLRO14498 428 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 TIMM9Q9Y5J7 89 aa12.17□□□□□ -0.46
SCLT1-205ENST00000503401 BORCS7-ASMTA0A0B4J1R7 106 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 IGLC2P0DOY2 106 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 PYYP10082 97 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 PRB4P10163 310 aaPredicted RBP12.16□□□□□ -0.46
SCLT1-205ENST00000503401 HLA-DMBP28068 263 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 RAB2AP61019 212 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 ZNF345Q14585 488 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 GDF5OSQ5U4N7 250 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
SCLT1-205ENST00000503401 SLC17A3O00476 420 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms