RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ELOA3CA0A087WX78 387 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 FGF7P21781 194 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 MEOX2P50222 304 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 OPCMLQ14982 345 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 MIC13Q5XKP0 118 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 ASB13Q8WXK3 278 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 C17orf77Q96MU5 243 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 RNF24Q9Y225 148 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 HSPB11Q9Y547 144 aa13.42□□□□□ -0.26
PDLIM7-209ENST00000503346 COX7A2P2O60397 106 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 RPL7P18124 248 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 RPL12P30050 165 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 ID1P41134 155 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 PSMB3P49720 205 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 CLINT1Q14677 625 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 Q6ZRG5 221 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 STHQ8IWL8 128 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 TP53TG1Q9Y2A0 90 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 STAB2Q8WWQ8 2551 aa13.41□□□□□ -0.26
PDLIM7-209ENST00000503346 KNCNA6PVL3 124 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 ISLRO14498 428 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 GIPP09681 153 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 B2MP61769 119 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 LINC00305Q7Z4B0 112 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 TRPT1Q86TN4 253 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 THAP6Q8TBB0 222 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 OVOL2Q9BRP0 275 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 DNAJC4Q9NNZ3 241 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 SLC39A9Q9NUM3 307 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 TENM3Q9P273 2699 aa13.4□□□□□ -0.26
PDLIM7-209ENST00000503346 ACTL10Q5JWF8 245 aa13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 OR1L4Q8NGR5 311 aa13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 ATP5SQ99766 215 aa13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 WDR61Q9GZS3 305 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 PXMP4Q9Y6I8 212 aa13.39□□□□□ -0.27
PDLIM7-209ENST00000503346 NBEAL2Q6ZNJ1 2754 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 A0A087X0K7 114 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 FGL1Q08830 312 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 DEFB135Q30KP9 77 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 RNF183Q96D59 192 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 LINC00052Q96N35 136 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 PFDN5Q99471 154 aa13.38□□□□□ -0.27
PDLIM7-209ENST00000503346 SPRY2O43597 315 aa13.37□□□□□ -0.27
PDLIM7-209ENST00000503346 SPP1P10451 314 aa13.37□□□□□ -0.27
PDLIM7-209ENST00000503346 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-209ENST00000503346 MORN5Q5VZ52 161 aa13.37□□□□□ -0.27
PDLIM7-209ENST00000503346 H3BMM0 161 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 MORN3Q6PF18 240 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 FOXI2Q6ZQN5 318 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 DNAH7Q8WXX0 4024 aa13.36□□□□□ -0.27
PDLIM7-209ENST00000503346 TRAV8-2A0A0B4J237 113 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 CA1P00915 261 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 GIG44P09565 113 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 TMEM41BQ5BJD5 291 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 Q5BKY6 102 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 BPIFA4PQ86YQ2 179 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 ZNF709Q8N972 641 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 C20orf173Q96LM9 149 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 SMIM3Q9BZL3 60 aa13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 SAV1Q9H4B6 383 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-209ENST00000503346 CXCL2P19875 107 aa13.34□□□□□ -0.27
PDLIM7-209ENST00000503346 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
PDLIM7-209ENST00000503346 AQP10Q96PS8 301 aa13.34□□□□□ -0.27
PDLIM7-209ENST00000503346 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-209ENST00000503346 RPRMQ9NS64 109 aa13.34□□□□□ -0.27
PDLIM7-209ENST00000503346 C17orf112F2Z3M2 114 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 IFNA5P01569 189 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 C4BPBP20851 252 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 DEFB1P60022 68 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 CLUHP3Q96NS8 147 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
PDLIM7-209ENST00000503346 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 IGLC2P0DOY2 106 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 GCSAMLQ5JQS6 135 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 MUC7Q8TAX7 377 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 SCGB1C1Q8TD33 95 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 HRH4Q9H3N8 390 aa13.32□□□□□ -0.28
PDLIM7-209ENST00000503346 A0A0J9YX75 114 aa13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 NUTF2P61970 127 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 IGFL4Q6B9Z1 124 aa13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 OR2T35Q8NGX2 323 aa13.31□□□□□ -0.28
PDLIM7-209ENST00000503346 F6UB75 175 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 C3orf84H3BNL1 204 aa13.3□□□□□ -0.28
PDLIM7-209ENST00000503346 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms