RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CACNG5Q9UF02 275 aa5.26□□□□□ -1.57
CLCN3-203ENST00000502998 ANAPC10Q9UM13 185 aa5.26□□□□□ -1.57
CLCN3-203ENST00000502998 PCSK5Q92824 1860 aa5.26□□□□□ -1.57
CLCN3-203ENST00000502998 TRAV27A0A087WT01 109 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 TRBV5-7A0A0A0MS05 114 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 A8MWV9 139 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 NPIPB11E5RHQ5 1161 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM72CH0Y354 149 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 PEBP1P30086 187 aaKnown RBP5.25□□□□□ -1.57
CLCN3-203ENST00000502998 VMA21Q3ZAQ7 101 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF542PQ5EBM4 170 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM72AQ5TYM5 149 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM72DQ6L9T8 149 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 Q6P435 159 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 LHFPL1Q86WI0 220 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM72BQ86X60 149 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM90A1Q86YD7 464 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 C15orf53Q8NAA6 179 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 OR10AC1Q8NH08 325 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 PIFOQ8TCI5 191 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 COPS9Q8WXC6 57 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 FAM3DQ96BQ1 224 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 PLA2G12AQ9BZM1 189 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF442Q9H7R0 627 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 DOCK4Q8N1I0 1966 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 EXPH5Q8NEV8 1989 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 ITPR3Q14573 2671 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 DOCK9Q9BZ29 2069 aa5.25□□□□□ -1.57
CLCN3-203ENST00000502998 C2CD3Q4AC94 2353 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 UTP20O75691 2785 aaKnown RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 TRAV12-2A0A075B6T6 113 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 A0A087WWL8 130 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 FAM240AA0A1B0GVK7 77 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 C5orf63A6NC05 138 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 RBAKDNA6NC62 111 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 EPM2AB3EWF7 344 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 PRSS46E5RG02 174 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 H3BTX0 84 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 BMPR1BO00238 502 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 NDUFS7O75251 213 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 LEPROTL1O95214 131 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 NUDT14O95848 222 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 SCGB1C2P0DMR2 95 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 PYYP10082 97 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 MAGEA5P43359 124 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 RPS21P63220 83 aaKnown RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 FAM219BQ5XKK7 198 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF627Q7L945 461 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 MRPL55Q7Z7F7 128 aaKnown RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 TRAPPC6BQ86SZ2 158 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 C11orf53Q8IXP5 236 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 AMN1Q8IY45 258 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 CIARTQ8N365 385 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 NFAM1Q8NET5 270 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 OR2T6Q8NHC8 308 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 IL1F10Q8WWZ1 152 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF837Q96EG3 531 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-203ENST00000502998 LINC01600Q96MT4 127 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 FOXB1Q99853 325 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 PRDM14Q9GZV8 571 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 OR10A2Q9H208 303 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 C11orf1Q9H5F2 150 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 AP5S1Q9NUS5 200 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 HCFC1P51610 2035 aa5.24□□□□□ -1.57
CLCN3-203ENST00000502998 TRAV26-2A0A0B4J265 109 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 LY6G6EA0A0G2JKS1 128 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 SPTY2D1-AS1A0A0U1RR47 76 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 CXorf51AA0A1B0GTR3 108 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 TMEM150CB9EJG8 249 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 K7ESM1 405 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 SSSCA1O60232 199 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 PDCD6O75340 191 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 IGF1P05019 195 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 HLA-DRB4P13762 266 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 EMDP50402 254 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 VKORC1L1Q8N0U8 176 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 LRRC29Q8WV35 223 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 NPIPB3Q92617 1050 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 CHCHD5Q9BSY4 110 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 ZNF286AQ9HBT8 521 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 TIMM9Q9Y5J7 89 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 SELENOKQ9Y6D0 94 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 U3KQA8 63 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 HLA-DRB4X5D2U9 266 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 CACNA1DQ01668 2161 aa5.23□□□□□ -1.57
CLCN3-203ENST00000502998 COL27A1Q8IZC6 1860 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-203ENST00000502998 TRAV2A0A0B4J234 112 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 TRAV8-4A0A0B4J246 113 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 A0A0U1RQV1 116 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 LINC01619G3V211 115 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 J3QKU1 62 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 IGHG2P01859 326 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 CD7P09564 240 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 FKBP2P26885 142 aaKnown RBP5.22□□□□□ -1.57
CLCN3-203ENST00000502998 DSCR4P56555 118 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-203ENST00000502998 ARL16Q0P5N6 197 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 KIF26BQ2KJY2 2108 aa5.22□□□□□ -1.57
CLCN3-203ENST00000502998 DEFB133Q30KQ1 61 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms